#!/usr/bin/make -f DH_VERBOSE := 1 export DEB_BUILD_MAINT_OPTIONS=hardening=+all export PYBUILD_NAME=pybedtools export MATPLOTLIBRC=$(CURDIR)/debian/ export PYBUILD_BEFORE_TEST= ifneq ($(PYBUILD_AUTOPKGTEST), 1) PYBUILD_BEFORE_TEST= cp {dir}/debian/mpl-expected.png {build_dir}/pybedtools/test/ ; endif PYBUILD_BEFORE_TEST+= \ python3 {dir}/setup.py install --user ; \ export HOME=$(CURDIR)/fakehome export PYBUILD_TEST_ARGS=-k "not test_chromsizes" ifeq ($(PYBUILD_AUTOPKGTEST), 1) PYBUILD_TEST_ARGS+={dir}/pybedtools/test/ endif export PYBUILD_AFTER_TEST=cd {dir}/docs ; make clean doctest export HOME=$(CURDIR)/fakehome export PATH:=$(PATH):$(HOME)/.local/bin %: dh $@ --with python3,sphinxdoc --buildsystem=pybuild override_dh_auto_build: python3 setup.py cythonize dh_auto_build python3 setup.py develop --user sphinx-build -N -b html docs/source docs/html override_dh_install: dh_install rm -f debian/python3-pybedtools/usr/lib/python3*/dist-packages/pybedtools/test/prevent_open_file_regression \ debian/python3-pybedtools/usr/lib/python3*/dist-packages/foo.bed \ debian/python3-pybedtools/usr/lib/python3*/dist-packages/genome.txt override_dh_auto_clean: /bin/rm -rf fakehome .eggs .pybuild .pytest_cache /bin/rm -rf debian/python3-pybedtools debian/files /bin/rm -rf pybedtools.egg-info /bin/rm -rf pybedtools/scripts/__pycache__/ /bin/rm -rf pybedtools/contrib/__pycache__/ /bin/rm -rf pybedtools/__pycache__/ find pybedtools -name "*.so" -o -name "*.o" | xargs -r rm rm -rf build rm -rf docs/build docs/*.bed docs/*.genome rm -rf dist /bin/rm -rf pybedtools/cbedtools.cpp pybedtools/featurefuncs.cpp find docs/source/autodocs/ -name "*.rst" | xargs -r /bin/rm # dh_auto_clean