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spades

genome assembler for single-cell and isolates data sets

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general
  • source: spades (main)
  • version: 4.0.0+really3.15.5+dfsg-3.1
  • maintainer: Debian Med Packaging Team (archive) (DMD) (LowNMU)
  • uploaders: Andreas Tille [DMD] – Sascha Steinbiss [DMD] – Alexandre Mestiashvili [DMD] – Michael R. Crusoe [DMD] – Étienne Mollier [DMD]
  • arch: amd64
  • std-ver: 4.7.2
  • VCS: Git (Browse, QA)
versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]
[pool directory]
  • o-o-stable: 3.13.1+dfsg-2
  • oldstable: 3.15.5+dfsg-2
  • stable: 4.0.0+really3.15.5+dfsg-1
  • testing: 4.0.0+really3.15.5+dfsg-3.1
  • unstable: 4.0.0+really3.15.5+dfsg-3.1
versioned links
  • 3.13.1+dfsg-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 3.15.5+dfsg-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 4.0.0+really3.15.5+dfsg-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 4.0.0+really3.15.5+dfsg-3.1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
binaries
  • spades
action needed
Marked for autoremoval on 04 November due to petsc: #1102465 high
Version 4.0.0+really3.15.5+dfsg-3.1 of spades is marked for autoremoval from testing on Wed 04 Nov 2026. It depends (transitively) on petsc, affected by #1102465. You should try to prevent the removal by fixing these RC bugs.
Created: 2026-10-04 Last update: 2026-10-20 20:33
A new upstream version is available: 4.3.0 high
A new upstream version 4.3.0 is available, you should consider packaging it.
Created: 2026-09-22 Last update: 2026-10-20 19:30
lintian reports 1 error and 426 warnings high
Lintian reports 1 error and 426 warnings about this package. You should make the package lintian clean getting rid of them.
Created: 2025-10-21 Last update: 2026-05-27 16:31
version in VCS is newer than in repository, is it time to upload? normal
vcswatch reports that this package seems to have a new changelog entry (version 4.3.0+dfsg-1, distribution UNRELEASED) and new commits in its VCS. You should consider whether it's time to make an upload.

Here are the relevant commit messages:
commit 1a0f7bcdedeecbc87dced1803cc7a796053b5f18
Author: Andreas Tille <tille@debian.org>
Date:   Tue Oct 20 16:13:46 2026 +0100

    Reformat the Last-Update date as ISO YYYY-MM-DD.
    
    Changes-By: lintian-brush
    Fixes: lintian: source: invalid-dep3-format-patch-wrong-last-update [debian/patches/python3.patch]
    Fixes: lintian: source: invalid-dep3-format-patch-wrong-last-update [debian/patches/python3.12.patch]
    See-also: https://lintian.debian.org/tags/invalid-dep3-format-patch-wrong-last-update.html

commit f4927d8885a82cc00aac12110dc4fcad65430631
Author: Andreas Tille <tille@debian.org>
Date:   Tue Oct 20 17:13:34 2026 +0200

    Drop 'Rules-Requires-Root: no' from d/control (routine-update)

commit fa0e64abc81684c047bfb4b6965d3887dac94e66
Author: Andreas Tille <tille@debian.org>
Date:   Tue Oct 20 17:13:32 2026 +0200

    Changes made by cme

commit 4767ac6fbd2731233b968765e5808711557130aa
Author: Andreas Tille <tille@debian.org>
Date:   Tue Oct 20 17:09:45 2026 +0200

    Standards-Version: 4.7.4 (routine-update)

commit 5e8bdc96e6bad4e47a0259f8b35cdf707eb8c0d0
Merge: e363a77 2e2a46d
Author: Andreas Tille <tille@debian.org>
Date:   Tue Oct 20 17:09:44 2026 +0200

    Update upstream source from tag 'upstream/4.3.0+dfsg'
    
    Update to upstream version '4.3.0+dfsg'
    with Debian dir b611b35f06bd9d412f4eba406e0feb99b0a8d6aa

commit 2e2a46d1666e664c1b0cddc4eeba7e584f98b293
Author: Andreas Tille <tille@debian.org>
Date:   Tue Oct 20 17:09:29 2026 +0200

    New upstream version 4.3.0+dfsg

commit e363a7738d5688fbea9db4684a1b8207e5d6d57f
Author: Andreas Tille <tille@debian.org>
Date:   Tue Oct 20 17:09:28 2026 +0200

    New upstream version

commit 5dc367041ebf61cde0de5a5d288fa82bd5dcf027
Author: Andreas Tille <tille@debian.org>
Date:   Tue Oct 20 17:09:06 2026 +0200

    Packaging update (routine-update)
Created: 2026-10-20 Last update: 2026-10-20 19:02
debian/patches: 9 patches to forward upstream low

Among the 22 debian patches available in version 4.0.0+really3.15.5+dfsg-3.1 of the package, we noticed the following issues:

  • 9 patches where the metadata indicates that the patch has not yet been forwarded upstream. You should either forward the patch upstream or update the metadata to document its real status.
Created: 2023-02-26 Last update: 2026-09-22 18:00
Standards version of the package is outdated. wishlist
The package should be updated to follow the last version of Debian Policy (Standards-Version 4.7.4 instead of 4.7.2).
Created: 2025-12-23 Last update: 2026-09-22 19:31
testing migrations
  • This package will soon be part of the auto-libssw transition. You might want to ensure that your package is ready for it. You can probably find supplementary information in the debian-release archives or in the corresponding release.debian.org bug.
news
[rss feed]
  • [2026-09-25] spades 4.0.0+really3.15.5+dfsg-3.1 MIGRATED to testing (Debian testing watch)
  • [2026-09-22] Accepted spades 4.0.0+really3.15.5+dfsg-3.1 (source) into unstable (Maximiliano Curia)
  • [2026-09-20] spades REMOVED from testing (Debian testing watch)
  • [2025-10-23] spades 4.0.0+really3.15.5+dfsg-3 MIGRATED to testing (Debian testing watch)
  • [2025-10-20] Accepted spades 4.0.0+really3.15.5+dfsg-3 (source) into unstable (Andreas Tille)
  • [2025-09-22] spades 4.0.0+really3.15.5+dfsg-2 MIGRATED to testing (Debian testing watch)
  • [2025-09-19] Accepted spades 4.0.0+really3.15.5+dfsg-2 (source) into unstable (Nilesh Patra)
  • [2025-04-14] spades 4.0.0+really3.15.5+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2025-04-12] Accepted spades 4.0.0+really3.15.5+dfsg-1 (source) into unstable (Pierre Gruet)
  • [2025-02-16] Accepted spades 4.0.0+dfsg1-2 (source) into unstable (Andreas Tille)
  • [2024-12-16] spades 3.15.5+dfsg-8 MIGRATED to testing (Debian testing watch)
  • [2024-12-13] Accepted spades 3.15.5+dfsg-8 (source) into unstable (Pierre Gruet)
  • [2024-10-02] Accepted spades 4.0.0+dfsg1-1 (source) into experimental (Pierre Gruet)
  • [2024-02-04] spades 3.15.5+dfsg-7 MIGRATED to testing (Debian testing watch)
  • [2024-02-02] Accepted spades 3.15.5+dfsg-7 (source) into unstable (Andreas Tille)
  • [2023-12-06] spades 3.15.5+dfsg-6 MIGRATED to testing (Debian testing watch)
  • [2023-12-03] Accepted spades 3.15.5+dfsg-6 (source) into unstable (Étienne Mollier)
  • [2023-09-23] spades 3.15.5+dfsg-5 MIGRATED to testing (Debian testing watch)
  • [2023-09-21] Accepted spades 3.15.5+dfsg-5 (source) into unstable (Andreas Tille)
  • [2023-08-11] spades 3.15.5+dfsg-4 MIGRATED to testing (Debian testing watch)
  • [2023-08-09] Accepted spades 3.15.5+dfsg-4 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2023-07-23] spades 3.15.5+dfsg-3 MIGRATED to testing (Debian testing watch)
  • [2023-07-20] Accepted spades 3.15.5+dfsg-3 (source) into unstable (Bo YU) (signed by: Étienne Mollier)
  • [2022-10-26] spades 3.15.5+dfsg-2 MIGRATED to testing (Debian testing watch)
  • [2022-10-23] Accepted spades 3.15.5+dfsg-2 (source) into unstable (Étienne Mollier)
  • [2022-08-05] spades 3.15.5+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2022-08-02] Accepted spades 3.15.5+dfsg-1 (source) into unstable (Étienne Mollier)
  • [2022-06-28] spades 3.15.4+dfsg-3 MIGRATED to testing (Debian testing watch)
  • [2022-06-25] Accepted spades 3.15.4+dfsg-3 (source) into unstable (Étienne Mollier)
  • [2022-05-13] Accepted spades 3.15.4+dfsg-2 (source) into unstable (Lance Lin) (signed by: Andreas Tille)
  • 1
  • 2
bugs [bug history graph]
  • all: 2
  • RC: 0
  • I&N: 0
  • M&W: 2
  • F&P: 0
  • patch: 0
links
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  • debci
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  • version: 4.0.0+really3.15.5+dfsg-3

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