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python-cogent
framework for genomic biology
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general
source:
python-cogent
(
main
)
version:
2026.
10.
15-
1
maintainer:
Debian Med Packaging Team
(
archive
)
(
DMD
)
(
LowNMU
)
uploaders:
Andreas Tille
[
DMD
]
–
Steffen Moeller
[
DMD
]
arch:
any
std-ver:
4.7.4
VCS:
Git
(
Browse
,
QA
)
versions
[more versions can be listed by madison]
[old versions available from snapshot.debian.org]
[pool directory]
o-o-stable:
2020.
12.
21a+
dfsg-
4+
deb11u1
oldstable:
2023.
2.
12a1+
dfsg-
2+
deb12u1
testing:
2026.
6.
2a0+
dfsg-
3
unstable:
2026.
10.
15-
1
versioned links
2020.
12.
21a+
dfsg-
4+
deb11u1:
[.dsc, use dget on this link to retrieve source package]
[changelog]
[copyright]
[rules]
[control]
2023.
2.
12a1+
dfsg-
2+
deb12u1:
[.dsc, use dget on this link to retrieve source package]
[changelog]
[copyright]
[rules]
[control]
2026.
6.
2a0+
dfsg-
3:
[.dsc, use dget on this link to retrieve source package]
[changelog]
[copyright]
[rules]
[control]
2026.
10.
15-
1:
[.dsc, use dget on this link to retrieve source package]
[changelog]
[copyright]
[rules]
[control]
binaries
python3-cogent3
action needed
Debci
reports
failed tests
high
unstable
:
fail
(
log
)
The tests ran in 0:02:24
Last run: 2026-10-11T00:22:28.000Z
Previous status:
unknown
testing
:
pass
(
log
)
The tests ran in 0:05:41
Last run: 2026-10-24T07:12:40.000Z
Previous status:
unknown
stable
:
fail
(
log
)
The tests ran in 0:00:11
Last run: 2025-08-11T12:23:24.000Z
Previous status:
unknown
Marked for autoremoval on 22 November due to
jupyter-server-terminals
,
jupyterlab
,
numba
,
python-botocore
,
python-gevent
,
python-hypothesis
,
python-syrupy
:
#1150529
,
#1144998
,
#1144999
,
#1145153
,
#1145439
,
#1145458
,
#1147441
,
#1149388
high
Version 2026.6.2a0+dfsg-3 of python-cogent is marked for autoremoval from testing on Sun 22 Nov 2026.
It is affected by
#1150529
.
The removal of python-cogent will also cause the removal of (transitive) reverse dependency:
python-piqtree
.
It depends (transitively) on
jupyter-server-terminals
,
jupyterlab
,
numba
,
python-botocore
,
python-gevent
,
python-hypothesis
,
python-syrupy
, affected by
#1144998
,
#1144999
,
#1145153
,
#1145439
,
#1145458
,
#1147441
,
#1149388
.
You should try to prevent the removal by fixing these RC bugs.
A new upstream version is available:
2026.10.22
high
A new upstream version
2026.10.22
is available, you should consider packaging it.
The package has not entered testing even though the delay is over
normal
The package has not entered
testing
even though the 5-day delay is over.
Check why
.
lintian reports
1 warning
normal
Lintian reports
1 warning
about this package. You should make the package
lintian clean
getting rid of them.
testing migrations
excuses
:
Migration status for python-cogent (2026.6.2a0+dfsg-3 to 2026.10.15-1): BLOCKED: Maybe temporary, maybe blocked but Britney is missing information (check below)
Issues preventing migration:
∙ ∙ Missing build on
all
∙ ∙ Autopkgtest deferred: missing arch:all build
∙ ∙ Lintian check waiting for test results on all -
info
∙ ∙ Reproducibility check deferred on amd64: missing builds -
info
∙ ∙ Reproducibility check deferred on arm64: missing builds -
info
∙ ∙ Reproducibility check deferred on armhf: missing builds -
info
∙ ∙ Reproducibility check deferred on i386: missing builds -
info
Additional info (not blocking):
∙ ∙ Updating python-cogent will fix bugs in testing:
#1150529
∙ ∙ Piuparts tested OK -
https://piuparts.debian.org/sid/source/p/python-cogent.html
∙ ∙ 6 days old (needed 5 days)
Not considered
news
[rss feed]
[
2026-10-19
]
Accepted python-cogent 2026.10.15-1 (source) into unstable
(
Karsten Schöke
)
[
2026-10-15
]
Accepted python-cogent 2026.9.10-1 (source) into unstable
(
Karsten Schöke
)
[
2026-10-06
]
python-cogent 2026.6.2a0+dfsg-3 MIGRATED to testing
(
Debian testing watch
)
[
2026-10-03
]
Accepted python-cogent 2026.6.2a0+dfsg-3 (source) into unstable
(
Alexandre Detiste
)
[
2026-06-27
]
python-cogent 2026.6.2a0+dfsg-2 MIGRATED to testing
(
Debian testing watch
)
[
2026-06-24
]
Accepted python-cogent 2026.6.2a0+dfsg-2 (source) into unstable
(
Santiago Vila
)
[
2026-06-07
]
python-cogent 2026.6.2a0+dfsg-1 MIGRATED to testing
(
Debian testing watch
)
[
2026-06-05
]
Accepted python-cogent 2026.6.2a0+dfsg-1 (source) into unstable
(
Karsten Schöke
)
[
2026-06-03
]
Accepted python-cogent 2026.5.25a0+dfsg-3 (source) into unstable
(
Karsten Schöke
)
[
2026-06-03
]
python-cogent 2026.5.25a0+dfsg-2 MIGRATED to testing
(
Debian testing watch
)
[
2026-06-01
]
Accepted python-cogent 2026.5.25a0+dfsg-2 (source) into unstable
(
Karsten Schöke
)
[
2026-06-01
]
python-cogent 2026.5.25a0+dfsg-1 MIGRATED to testing
(
Debian testing watch
)
[
2026-05-27
]
Accepted python-cogent 2026.5.25a0+dfsg-1 (source) into unstable
(
Karsten Schöke
)
(signed by:
Andreas Tille
)
[
2024-07-05
]
Accepted python-cogent 2024.5.7a1+dfsg-3 (source) into unstable
(
Santiago Vila
)
[
2024-07-02
]
Accepted python-cogent 2024.5.7a1+dfsg-2 (source) into unstable
(
Andreas Tille
)
[
2024-06-27
]
Accepted python-cogent 2024.5.7a1+dfsg-1 (source) into unstable
(
Emmanuel Arias
)
[
2024-01-26
]
Accepted python-cogent 2023.12.15a1+dfsg-1 (source) into unstable
(
Andreas Tille
)
[
2024-01-16
]
python-cogent REMOVED from testing
(
Debian testing watch
)
[
2023-12-19
]
Accepted python-cogent 2020.12.21a+dfsg-4+deb11u1 (source) into oldstable-proposed-updates
(
Debian FTP Masters
)
(signed by:
Santiago Vila
)
[
2023-11-24
]
Accepted python-cogent 2023.2.12a1+dfsg-2+deb12u1 (source) into proposed-updates
(
Debian FTP Masters
)
(signed by:
Santiago Vila
)
[
2023-11-03
]
python-cogent 2023.2.12a1+dfsg-4 MIGRATED to testing
(
Debian testing watch
)
[
2023-10-28
]
Accepted python-cogent 2023.2.12a1+dfsg-4 (source) into unstable
(
Debian FTP Masters
)
(signed by:
Santiago Vila
)
[
2023-10-25
]
python-cogent 2023.2.12a1+dfsg-3 MIGRATED to testing
(
Debian testing watch
)
[
2023-10-20
]
Accepted python-cogent 2023.2.12a1+dfsg-3 (source) into unstable
(
Santiago Vila
)
[
2023-03-09
]
python-cogent 2023.2.12a1+dfsg-2 MIGRATED to testing
(
Debian testing watch
)
[
2023-02-24
]
Accepted python-cogent 2023.2.12a1+dfsg-2 (source) into unstable
(
Andreas Tille
)
[
2023-02-22
]
Accepted python-cogent 2023.2.12a1+dfsg-1 (source) into unstable
(
Andreas Tille
)
[
2023-02-22
]
python-cogent 2022.10.31a1+dfsg-3 MIGRATED to testing
(
Debian testing watch
)
[
2023-02-11
]
Accepted python-cogent 2022.10.31a1+dfsg-3 (source) into unstable
(
Nilesh Patra
)
[
2023-02-10
]
Accepted python-cogent 2022.10.31a1+dfsg-2 (source) into unstable
(
Andreas Tille
)
1
2
bugs
[bug history graph]
all:
0
links
homepage
lintian
(
0
,
1
)
buildd:
logs
,
reproducibility
,
cross
popcon
browse source code
other distros
debian patches
debci
ubuntu
[Information about Ubuntu for Debian Developers]
version:
2026.6.2a0+dfsg-2
1 bug
![[bug history graph]](https://qa.debian.org/data/bts/graphs/p/python-cogent.png){kind=link}