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bamtools

toolkit for manipulating BAM (genome alignment) files

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general

source: bamtools (main)
version: 2.5.3+dfsg-1
maintainer: Debian Med Packaging Team (archive) (DMD) (LowNMU)
uploaders: Andreas Tille [DMD] – Kevin Murray [DMD] – Michael R. Crusoe [DMD] – Étienne Mollier [DMD]
arch: all any
std-ver: 4.7.2
VCS: Git (Browse, QA)

versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]

[pool directory]

o-o-stable: 2.5.1+dfsg-9
oldstable: 2.5.2+dfsg-4
stable: 2.5.2+dfsg-6
testing: 2.5.3+dfsg-1
unstable: 2.5.3+dfsg-1

versioned links

2.5.1+dfsg-9: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.5.2+dfsg-4: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.5.2+dfsg-6: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
2.5.3+dfsg-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]

binaries

bamtools
libbamtools-dev
libbamtools-doc
libbamtools2.5.3

action needed

Debci reports failed tests high

unstable: fail (log)
The tests ran in 0:00:27
Last run: 2025-10-14T21:00:35.000Z
Previous status: unknown

testing: pass (log)
The tests ran in 0:00:17
Last run: 2025-08-01T18:07:00.000Z
Previous status: unknown

stable: pass (log)
The tests ran in 0:00:31
Last run: 2025-08-11T09:36:11.000Z
Previous status: unknown

Created: 2025-10-14 Last update: 2025-10-21 19:30

debian/patches: 1 patch with invalid metadata high

Among the 3 debian patches available in version 2.5.3+dfsg-1 of the package, we noticed the following issues:

1 patch with invalid metadata that ought to be fixed.

Created: 2023-02-26 Last update: 2025-09-28 10:33

news

[2025-09-30] bamtools 2.5.3+dfsg-1 MIGRATED to testing (Debian testing watch)
[2025-09-27] Accepted bamtools 2.5.3+dfsg-1 (source amd64 all) into unstable (Debian FTP Masters) (signed by: Dominique Belhachemi)
[2024-07-14] bamtools 2.5.2+dfsg-6 MIGRATED to testing (Debian testing watch)
[2024-07-12] Accepted bamtools 2.5.2+dfsg-6 (source) into unstable (Andreas Tille)
[2023-12-18] bamtools 2.5.2+dfsg-5 MIGRATED to testing (Debian testing watch)
[2023-12-18] bamtools 2.5.2+dfsg-5 MIGRATED to testing (Debian testing watch)
[2023-12-15] Accepted bamtools 2.5.2+dfsg-5 (source) into unstable (Étienne Mollier)
[2022-12-22] bamtools 2.5.2+dfsg-4 MIGRATED to testing (Debian testing watch)
[2022-12-22] bamtools 2.5.2+dfsg-4 MIGRATED to testing (Debian testing watch)
[2022-12-19] Accepted bamtools 2.5.2+dfsg-4 (source) into unstable (Étienne Mollier)
[2022-12-04] bamtools 2.5.2+dfsg-3 MIGRATED to testing (Debian testing watch)
[2022-12-02] Accepted bamtools 2.5.2+dfsg-3 (source) into unstable (Andreas Tille)
[2022-09-05] bamtools 2.5.2+dfsg-2 MIGRATED to testing (Debian testing watch)
[2022-09-04] Accepted bamtools 2.5.2+dfsg-2 (source) into unstable (Andreas Tille) (signed by: Étienne Mollier)
[2022-09-04] Accepted bamtools 2.5.2+dfsg-1 (source amd64 all) into experimental, experimental (Debian FTP Masters) (signed by: Andreas Tille)
[2021-11-09] bamtools 2.5.1+dfsg-10 MIGRATED to testing (Debian testing watch)
[2021-11-06] Accepted bamtools 2.5.1+dfsg-10 (source) into unstable (Étienne Mollier)
[2021-04-21] bamtools 2.5.1+dfsg-9 MIGRATED to testing (Debian testing watch)
[2021-04-15] Accepted bamtools 2.5.1+dfsg-9 (source) into unstable (Andreas Tille)
[2021-01-29] bamtools 2.5.1+dfsg-8 MIGRATED to testing (Debian testing watch)
[2021-01-27] Accepted bamtools 2.5.1+dfsg-8 (source) into unstable (Andreas Tille)
[2020-05-31] bamtools 2.5.1+dfsg-7 MIGRATED to testing (Debian testing watch)
[2020-05-29] Accepted bamtools 2.5.1+dfsg-7 (source) into unstable (Andreas Tille)
[2020-05-29] bamtools 2.5.1+dfsg-6 MIGRATED to testing (Debian testing watch)
[2020-05-27] Accepted bamtools 2.5.1+dfsg-6 (source) into unstable (Andreas Tille)
[2019-12-16] bamtools 2.5.1+dfsg-5 MIGRATED to testing (Debian testing watch)
[2019-12-11] Accepted bamtools 2.5.1+dfsg-5 (source) into unstable (Andreas Tille)
[2018-04-11] bamtools 2.5.1+dfsg-3 MIGRATED to testing (Debian testing watch)
[2018-04-10] bamtools 2.5.1+dfsg-3 MIGRATED to testing (Debian testing watch)
[2018-04-05] Accepted bamtools 2.5.1+dfsg-3 (source) into unstable (Andreas Tille)

1
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bugs [bug history graph]

all: 0

links

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