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bedtools

suite of utilities for comparing genomic features

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general
  • source: bedtools (main)
  • version: 2.31.1+dfsg-2
  • maintainer: Debian Med Packaging Team (archive) (DMD) (LowNMU)
  • uploaders: Étienne Mollier [DMD] – Andreas Tille [DMD] – Charles Plessy [DMD]
  • arch: all any
  • std-ver: 4.6.2
  • VCS: Git (Browse, QA)
versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]
[pool directory]
  • o-o-stable: 2.27.1+dfsg-4
  • oldstable: 2.30.0+dfsg-1
  • stable: 2.30.0+dfsg-3
  • testing: 2.31.1+dfsg-2
  • unstable: 2.31.1+dfsg-2
versioned links
  • 2.27.1+dfsg-4: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 2.30.0+dfsg-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 2.30.0+dfsg-3: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 2.31.1+dfsg-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
binaries
  • bedtools
  • bedtools-test
action needed
1 bug tagged patch in the BTS normal
The BTS contains patches fixing 1 bug, consider including or untagging them.
Created: 2025-05-05 Last update: 2025-05-23 02:00
Multiarch hinter reports 1 issue(s) normal
There are issues with the multiarch metadata for this package.
  • bedtools-test could have its dependency on python3 annotated with :any
Created: 2023-06-24 Last update: 2025-05-23 00:34
lintian reports 77 warnings normal
Lintian reports 77 warnings about this package. You should make the package lintian clean getting rid of them.
Created: 2023-12-05 Last update: 2025-04-10 14:00
debian/patches: 5 patches to forward upstream low

Among the 6 debian patches available in version 2.31.1+dfsg-2 of the package, we noticed the following issues:

  • 5 patches where the metadata indicates that the patch has not yet been forwarded upstream. You should either forward the patch upstream or update the metadata to document its real status.
Created: 2023-02-26 Last update: 2023-12-05 11:16
Standards version of the package is outdated. wishlist
The package should be updated to follow the last version of Debian Policy (Standards-Version 4.7.2 instead of 4.6.2).
Created: 2024-04-07 Last update: 2025-02-27 13:25
news
[rss feed]
  • [2023-12-09] bedtools 2.31.1+dfsg-2 MIGRATED to testing (Debian testing watch)
  • [2023-12-04] Accepted bedtools 2.31.1+dfsg-2 (source) into unstable (Étienne Mollier)
  • [2023-11-26] bedtools 2.31.1+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2023-11-24] Accepted bedtools 2.31.1+dfsg-1 (source) into unstable (Étienne Mollier)
  • [2023-11-21] bedtools 2.31.0+dfsg-2 MIGRATED to testing (Debian testing watch)
  • [2023-11-18] Accepted bedtools 2.31.0+dfsg-2 (source) into unstable (Étienne Mollier)
  • [2023-06-26] bedtools 2.31.0+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2023-06-23] Accepted bedtools 2.31.0+dfsg-1 (source) into unstable (Étienne Mollier)
  • [2023-05-03] bedtools 2.30.0+dfsg-3 MIGRATED to testing (Debian testing watch)
  • [2023-04-13] Accepted bedtools 2.30.0+dfsg-3 (source) into unstable (Andreas Tille)
  • [2021-09-04] bedtools 2.30.0+dfsg-2 MIGRATED to testing (Debian testing watch)
  • [2021-09-02] Accepted bedtools 2.30.0+dfsg-2 (source) into unstable (Andreas Tille)
  • [2021-01-30] bedtools 2.30.0+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2021-01-27] Accepted bedtools 2.30.0+dfsg-1 (source) into unstable (Étienne Mollier)
  • [2021-01-22] bedtools 2.29.2+dfsg-6 MIGRATED to testing (Debian testing watch)
  • [2021-01-17] Accepted bedtools 2.29.2+dfsg-6 (source) into unstable (Étienne Mollier)
  • [2021-01-04] Accepted bedtools 2.29.2+dfsg-5 (source) into unstable (Andreas Tille)
  • [2020-12-20] Accepted bedtools 2.29.2+dfsg-4 (source) into unstable (Andreas Tille)
  • [2020-05-09] bedtools 2.29.2+dfsg-3 MIGRATED to testing (Debian testing watch)
  • [2020-02-14] Accepted bedtools 2.29.2+dfsg-3 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2020-02-12] Accepted bedtools 2.29.2+dfsg-2 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2020-01-23] Accepted bedtools 2.29.2+dfsg-1 (source) into unstable (Steffen Moeller)
  • [2019-12-05] Accepted bedtools 2.29.0+dfsg-2 (source) into unstable (Andreas Tille)
  • [2019-11-06] Accepted bedtools 2.29.0+dfsg-1 (source) into unstable (Steffen Moeller)
  • [2019-09-01] Accepted bedtools 2.28.0+dfsg1-1 (source) into unstable (Andreas Tille)
  • [2019-07-26] Accepted bedtools 2.28.0+dfsg-3 (source amd64 all) into unstable (Steffen Moeller)
  • [2019-07-26] Accepted bedtools 2.28.0+dfsg-1 (source amd64 all) into unstable (Steffen Moeller)
  • [2019-02-24] bedtools 2.27.1+dfsg-4 MIGRATED to testing (Debian testing watch)
  • [2019-02-14] Accepted bedtools 2.27.1+dfsg-4 (source) into unstable (Charles Plessy)
  • [2019-02-07] Accepted bedtools 2.27.1+dfsg-3 (source) into unstable (Michael R. Crusoe) (signed by: Andreas Tille)
  • 1
  • 2
bugs [bug history graph]
  • all: 2
  • RC: 0
  • I&N: 0
  • M&W: 2
  • F&P: 0
  • patch: 1
links
  • homepage
  • lintian (0, 77)
  • buildd: logs, reproducibility, cross
  • popcon
  • browse source code
  • edit tags
  • other distros
  • screenshots
  • debian patches
  • debci
ubuntu Ubuntu logo [Information about Ubuntu for Debian Developers]
  • version: 2.31.1+dfsg-2

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