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bowtie

Ultrafast memory-efficient short read aligner

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general
  • source: bowtie (main)
  • version: 1.3.1-3
  • maintainer: Debian Med Packaging Team (archive) (DMD) (LowNMU)
  • uploaders: Andreas Tille [DMD] – Steffen Moeller [DMD] – Alexandre Mestiashvili [DMD] – Ognyan Kulev [DMD] – Stephan Struckmann [DMD]
  • arch: all alpha arm64 mips64el ppc64 ppc64el s390x sparc64
  • std-ver: 4.6.2
  • VCS: Git (Browse, QA)
versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]
[pool directory]
  • o-o-stable: 1.2.2+dfsg-4
  • oldstable: 1.3.0+dfsg1-1
  • stable: 1.3.1-1
  • testing: 1.3.1-3
  • unstable: 1.3.1-3
versioned links
  • 1.2.2+dfsg-4: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 1.3.0+dfsg1-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 1.3.1-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 1.3.1-3: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
binaries
  • bowtie
  • bowtie-examples
action needed
lintian reports 1 warning high
Lintian reports 1 warning about this package. You should make the package lintian clean getting rid of them.
Created: 2021-10-13 Last update: 2024-03-01 12:02
version in VCS is newer than in repository, is it time to upload? normal
vcswatch reports that this package seems to have a new changelog entry (version 1.3.1-4, distribution UNRELEASED) and new commits in its VCS. You should consider whether it's time to make an upload.

Here are the relevant commit messages:
commit 2138e006ec655907a84c54eec4962734c1b7c4df
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Thu Mar 7 12:09:08 2024 +0100

    d/control: and use "any" :-)

commit 746b5544925cc82303b43947c9a0f0b81696bdef
Author: Michael R. Crusoe <michael.crusoe@gmail.com>
Date:   Thu Mar 7 08:59:56 2024 +0100

    d/control: simplify architecture specification by using the provisions from the architecture-properties package.
Created: 2024-03-07 Last update: 2025-05-19 19:32
debian/patches: 7 patches to forward upstream low

Among the 8 debian patches available in version 1.3.1-3 of the package, we noticed the following issues:

  • 7 patches where the metadata indicates that the patch has not yet been forwarded upstream. You should either forward the patch upstream or update the metadata to document its real status.
Created: 2023-02-26 Last update: 2024-01-25 21:33
Standards version of the package is outdated. wishlist
The package should be updated to follow the last version of Debian Policy (Standards-Version 4.7.2 instead of 4.6.2).
Created: 2024-04-07 Last update: 2025-02-27 13:25
news
[rss feed]
  • [2024-01-28] bowtie 1.3.1-3 MIGRATED to testing (Debian testing watch)
  • [2024-01-25] Accepted bowtie 1.3.1-3 (source) into unstable (Andreas Tille)
  • [2023-12-18] bowtie 1.3.1-2 MIGRATED to testing (Debian testing watch)
  • [2023-12-15] Accepted bowtie 1.3.1-2 (source) into unstable (Andreas Tille)
  • [2021-09-27] bowtie 1.3.1-1 MIGRATED to testing (Debian testing watch)
  • [2021-09-22] Accepted bowtie 1.3.1-1 (source) into unstable (Andreas Tille)
  • [2020-10-18] bowtie 1.3.0+dfsg1-1 MIGRATED to testing (Debian testing watch)
  • [2020-10-13] Accepted bowtie 1.3.0+dfsg1-1 (source) into unstable (Andreas Tille)
  • [2020-10-12] Accepted bowtie 1.3.0+dfsg-3 (source) into unstable (Andreas Tille)
  • [2020-10-12] Accepted bowtie 1.3.0+dfsg-2 (source) into unstable (Andreas Tille)
  • [2020-09-15] Accepted bowtie 1.3.0+dfsg-1 (source) into unstable (Andreas Tille)
  • [2020-01-15] bowtie 1.2.3+dfsg-4 MIGRATED to testing (Debian testing watch)
  • [2020-01-11] Accepted bowtie 1.2.3+dfsg-4 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2020-01-08] Accepted bowtie 1.2.3+dfsg-3 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2019-09-08] bowtie 1.2.3+dfsg-2 MIGRATED to testing (Debian testing watch)
  • [2019-09-05] Accepted bowtie 1.2.3+dfsg-2 (source) into unstable (Alexandre Mestiashvili)
  • [2019-07-14] bowtie 1.2.3+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2019-07-11] Accepted bowtie 1.2.3+dfsg-1 (source) into unstable (Alexandre Mestiashvili)
  • [2018-09-08] bowtie 1.2.2+dfsg-4 MIGRATED to testing (Debian testing watch)
  • [2018-09-05] Accepted bowtie 1.2.2+dfsg-4 (source amd64 all) into unstable (Alexandre Mestiashvili)
  • [2018-05-26] bowtie 1.2.2+dfsg-3 MIGRATED to testing (Debian testing watch)
  • [2018-05-23] Accepted bowtie 1.2.2+dfsg-3 (source) into unstable (Andreas Tille)
  • [2018-02-06] bowtie 1.2.2+dfsg-2 MIGRATED to testing (Debian testing watch)
  • [2018-01-31] Accepted bowtie 1.2.2+dfsg-2 (source amd64 all) into unstable (Alexandre Mestiashvili)
  • [2017-12-24] bowtie 1.2.2+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2017-12-18] Accepted bowtie 1.2.2+dfsg-1 (source) into unstable (Alexandre Mestiashvili) (signed by: Andreas Tille)
  • [2017-10-29] bowtie 1.2.1.1+dfsg-1 MIGRATED to testing (Debian testing watch)
  • [2017-10-24] Accepted bowtie 1.2.1.1+dfsg-1 (source) into unstable (Alexandre Mestiashvili) (signed by: Andreas Tille)
  • [2017-06-08] Accepted bowtie 1.2.0+dfsg-1 (source amd64 all) into unstable (Stephan Struckmann) (signed by: Steffen Moeller)
  • [2016-10-20] bowtie 1.1.2-6 MIGRATED to testing (Debian testing watch)
  • 1
  • 2
bugs [bug history graph]
  • all: 0
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  • version: 1.3.1-3

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