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gubbins

phylogenetic analysis of genome sequences

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general
  • source: gubbins (main)
  • version: 3.4.3-2
  • maintainer: Debian Med Packaging Team (archive) (DMD) (LowNMU)
  • uploaders: Andreas Tille [DMD] – Étienne Mollier [DMD]
  • arch: any
  • std-ver: 4.7.3
  • VCS: Git (Browse, QA)
versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]
[pool directory]
  • o-o-stable: 2.4.1-4
  • oldstable: 2.4.1-5
  • stable: 3.4-2
  • testing: 3.4-2
  • unstable: 3.4.3-2
versioned links
  • 2.4.1-4: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 2.4.1-5: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 3.4-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 3.4.3-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
binaries
  • gubbins
action needed
Marked for autoremoval on 20 February due to multiprocess: #1125845, #1125027 high
Version 3.4-2 of gubbins is marked for autoremoval from testing on Fri 20 Feb 2026. It is affected by #1125845. It depends (transitively) on multiprocess, affected by #1125027. You should try to prevent the removal by fixing these RC bugs.
Created: 2026-01-14 Last update: 2026-02-05 17:32
lintian reports 2 warnings normal
Lintian reports 2 warnings about this package. You should make the package lintian clean getting rid of them.
Created: 2026-02-01 Last update: 2026-02-01 12:00
debian/patches: 3 patches to forward upstream low

Among the 7 debian patches available in version 3.4.3-2 of the package, we noticed the following issues:

  • 3 patches where the metadata indicates that the patch has not yet been forwarded upstream. You should either forward the patch upstream or update the metadata to document its real status.
Created: 2023-02-26 Last update: 2026-02-01 09:00
testing migrations
  • excuses:
    • Migrates after: numba
    • Migration status for gubbins (3.4-2 to 3.4.3-2): BLOCKED: Rejected/violates migration policy/introduces a regression
    • Issues preventing migration:
    • ∙ ∙ gubbins/i386 has unsatisfiable dependency
    • ∙ ∙ Autopkgtest for gubbins/3.4.3-2: amd64: Pass
    • ∙ ∙ Too young, only 4 of 5 days old
    • ∙ ∙ Depends: gubbins numba (not considered)
    • Additional info (not blocking):
    • ∙ ∙ Updating gubbins will fix bugs in testing: #1125845
    • ∙ ∙ Piuparts tested OK - https://piuparts.debian.org/sid/source/g/gubbins.html
    • ∙ ∙ Autopkgtest skipped on i386: not installable
    • ∙ ∙ Reproducible on amd64
    • ∙ ∙ Reproducible on arm64
    • ∙ ∙ Reproducible on armhf
    • ∙ ∙ Reproducible on i386
    • ∙ ∙ Reproducible on ppc64el
    • Not considered
news
[rss feed]
  • [2026-01-31] Accepted gubbins 3.4.3-2 (source) into unstable (Étienne Mollier)
  • [2025-10-11] gubbins 3.4-2 MIGRATED to testing (Debian testing watch)
  • [2025-10-06] gubbins REMOVED from testing (Debian testing watch)
  • [2025-03-02] gubbins 3.4-2 MIGRATED to testing (Debian testing watch)
  • [2025-02-28] Accepted gubbins 3.4-2 (source) into unstable (Étienne Mollier)
  • [2024-12-03] gubbins 3.4-1 MIGRATED to testing (Debian testing watch)
  • [2024-11-30] Accepted gubbins 3.4-1 (source) into unstable (Étienne Mollier)
  • [2024-05-25] gubbins 3.3.5-1 MIGRATED to testing (Debian testing watch)
  • [2024-05-22] Accepted gubbins 3.3.5-1 (source) into unstable (Étienne Mollier)
  • [2024-04-02] gubbins 3.3.3-1 MIGRATED to testing (Debian testing watch)
  • [2024-03-09] gubbins REMOVED from testing (Debian testing watch)
  • [2024-02-07] gubbins 3.3.3-1 MIGRATED to testing (Debian testing watch)
  • [2024-02-04] Accepted gubbins 3.3.3-1 (source) into unstable (Étienne Mollier)
  • [2023-12-19] gubbins 3.3.1-1 MIGRATED to testing (Debian testing watch)
  • [2023-12-16] Accepted gubbins 3.3.1-1 (source) into unstable (Étienne Mollier)
  • [2023-08-19] gubbins 3.3.0-3 MIGRATED to testing (Debian testing watch)
  • [2023-08-17] Accepted gubbins 3.3.0-3 (source) into unstable (Andreas Tille)
  • [2023-08-17] gubbins REMOVED from testing (Debian testing watch)
  • [2023-07-15] gubbins 3.3.0-2 MIGRATED to testing (Debian testing watch)
  • [2023-07-13] Accepted gubbins 3.3.0-2 (source) into unstable (Andreas Tille)
  • [2023-07-12] Accepted gubbins 3.3.0-1 (source) into unstable (Andreas Tille)
  • [2022-07-24] gubbins 2.4.1-5 MIGRATED to testing (Debian testing watch)
  • [2022-07-23] gubbins REMOVED from testing (Debian testing watch)
  • [2022-02-16] gubbins 2.4.1-5 MIGRATED to testing (Debian testing watch)
  • [2022-02-16] gubbins 2.4.1-5 MIGRATED to testing (Debian testing watch)
  • [2022-02-13] Accepted gubbins 2.4.1-5 (source) into unstable (Andreas Tille)
  • [2021-04-24] gubbins 2.4.1-4 MIGRATED to testing (Debian testing watch)
  • [2021-04-04] Accepted gubbins 2.4.1-4 (source) into unstable (Nilesh Patra)
  • [2020-11-04] gubbins 2.4.1-3 MIGRATED to testing (Debian testing watch)
  • [2020-11-02] Accepted gubbins 2.4.1-3 (source) into unstable (Étienne Mollier)
  • 1
  • 2
bugs [bug history graph]
  • all: 1
  • RC: 0
  • I&N: 0
  • M&W: 1
  • F&P: 0
  • patch: 0
links
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  • version: 3.4-2build1

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