Register | Log in

htsjdk

Choose email to subscribe with

general

source: htsjdk (main)
version: 4.3.0+dfsg-1
maintainer: Debian Med Packaging Team (archive) (DMD) (LowNMU)
uploaders: Andreas Tille [DMD] – Charles Plessy [DMD] – Vincent Danjean [DMD] – Olivier Sallou [DMD] – Pierre Gruet [DMD]
arch: all
std-ver: 4.7.3
VCS: Git (Browse, QA)

versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]

[pool directory]

o-o-stable: 2.23.0+dfsg-2
oldstable: 3.0.4+dfsg-2
stable: 4.1.3+dfsg-2
testing: 4.1.3+dfsg-2
unstable: 4.3.0+dfsg-1

versioned links

2.23.0+dfsg-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
3.0.4+dfsg-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
4.1.3+dfsg-2: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
4.3.0+dfsg-1: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]

binaries

libhtsjdk-java
libhtsjdk-java-doc

action needed

lintian reports 2 warnings normal

Lintian reports 2 warnings about this package. You should make the package lintian clean getting rid of them.

Created: 2025-04-10 Last update: 2025-12-26 12:30

debian/patches: 2 patches to forward upstream low

Among the 15 debian patches available in version 4.3.0+dfsg-1 of the package, we noticed the following issues:

2 patches where the metadata indicates that the patch has not yet been forwarded upstream. You should either forward the patch upstream or update the metadata to document its real status.

Created: 2023-02-26 Last update: 2025-12-26 06:30

testing migrations

excuses:
- Migration status for htsjdk (4.1.3+dfsg-2 to 4.3.0+dfsg-1): Waiting for test results or another package, or too young (no action required now - check later)
- Issues preventing migration:
- ∙ ∙ Too young, only 1 of 2 days old
- Additional info (not blocking):
- ∙ ∙ Piuparts tested OK - https://piuparts.debian.org/sid/source/h/htsjdk.html
- ∙ ∙ Autopkgtest skipped on i386: not installable (which is allowed)
- ∙ ∙ Autopkgtest skipped on ppc64el: not installable (which is allowed)
- ∙ ∙ Autopkgtest skipped on riscv64: not installable (which is allowed)
- ∙ ∙ Autopkgtest skipped on s390x: not installable (which is allowed)
- ∙ ∙ Autopkgtest for htsjdk/4.3.0+dfsg-1: amd64: Pass, arm64: Pass
- ∙ ∙ Waiting for reproducibility test results on amd64 - info ♻
- ∙ ∙ Reproducible on arm64 - info ♻
- ∙ ∙ Required age reduced by 3 days because of autopkgtest
- Not considered

news

[2025-12-25] Accepted htsjdk 4.3.0+dfsg-1 (source) into unstable (Pierre Gruet)
[2025-01-01] htsjdk 4.1.3+dfsg-2 MIGRATED to testing (Debian testing watch)
[2024-12-30] Accepted htsjdk 4.1.3+dfsg-2 (source) into unstable (Pierre Gruet)
[2024-12-29] htsjdk 4.1.3+dfsg-1 MIGRATED to testing (Debian testing watch)
[2024-12-26] Accepted htsjdk 4.1.3+dfsg-1 (source) into unstable (Pierre Gruet)
[2024-05-21] htsjdk 4.1.0+dfsg-2 MIGRATED to testing (Debian testing watch)
[2024-05-15] Accepted htsjdk 4.1.0+dfsg-2 (source) into unstable (Pierre Gruet)
[2024-02-14] htsjdk 4.1.0+dfsg-1 MIGRATED to testing (Debian testing watch)
[2024-02-11] Accepted htsjdk 4.1.0+dfsg-1 (source) into unstable (Pierre Gruet)
[2023-12-16] htsjdk 4.0.2+dfsg-2 MIGRATED to testing (Debian testing watch)
[2023-12-14] Accepted htsjdk 4.0.2+dfsg-2 (source) into unstable (Pierre Gruet)
[2023-12-14] Accepted htsjdk 4.0.2+dfsg-1 (source) into unstable (Pierre Gruet)
[2023-11-10] htsjdk 3.0.5+dfsg-2 MIGRATED to testing (Debian testing watch)
[2023-11-08] Accepted htsjdk 3.0.5+dfsg-2 (source) into unstable (Pierre Gruet)
[2023-06-26] htsjdk 3.0.5+dfsg-1 MIGRATED to testing (Debian testing watch)
[2023-06-20] Accepted htsjdk 3.0.5+dfsg-1 (source) into unstable (Pierre Gruet)
[2023-01-26] htsjdk 3.0.4+dfsg-2 MIGRATED to testing (Debian testing watch)
[2023-01-24] Accepted htsjdk 3.0.4+dfsg-2 (source) into unstable (Aaron M. Ucko)
[2023-01-02] htsjdk 3.0.4+dfsg-1 MIGRATED to testing (Debian testing watch)
[2022-12-27] Accepted htsjdk 3.0.4+dfsg-1 (source) into unstable (Pierre Gruet)
[2022-11-09] htsjdk 3.0.2+dfsg-1 MIGRATED to testing (Debian testing watch)
[2022-11-09] htsjdk 3.0.2+dfsg-1 MIGRATED to testing (Debian testing watch)
[2022-11-03] Accepted htsjdk 3.0.2+dfsg-1 (source) into unstable (Pierre Gruet)
[2022-11-01] Accepted htsjdk 3.0.2+dfsg-1~exp0 (source) into experimental (Pierre Gruet)
[2022-03-07] htsjdk 2.24.1+dfsg-3 MIGRATED to testing (Debian testing watch)
[2022-03-05] Accepted htsjdk 2.24.1+dfsg-3 (source) into unstable (Pierre Gruet)
[2022-03-04] Accepted htsjdk 2.24.1+dfsg-2 (source) into unstable (Pierre Gruet)
[2021-12-03] htsjdk 2.24.1+dfsg-1 MIGRATED to testing (Debian testing watch)
[2021-11-23] Accepted htsjdk 2.24.1+dfsg-1 (source) into unstable (Pierre Gruet)
[2020-09-27] htsjdk 2.23.0+dfsg-2 MIGRATED to testing (Debian testing watch)

1
2

bugs [bug history graph]

all: 0

links

homepage
lintian (0, 2)
buildd: logs, reproducibility
popcon
browse source code
edit tags
other distros
debian patches
debci

ubuntu

[Information about Ubuntu for Debian Developers]

version: 4.3.0+dfsg-1

Debian Package Tracker — Copyright 2013-2025 The Distro Tracker Developers

Report problems to the tracker.debian.org pseudo-package in the Debian BTS.

Documentation — Bugs — Git Repository — Contributing