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jaligner

Smith-Waterman algorithm with Gotoh's improvement

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general
  • source: jaligner (main)
  • version: 1.0+dfsg-11
  • maintainer: Debian Med Packaging Team (archive) (DMD) (LowNMU)
  • uploaders: Michael R. Crusoe [DMD]
  • arch: all
  • std-ver: 4.6.2
  • VCS: Git (Browse, QA)
versions [more versions can be listed by madison] [old versions available from snapshot.debian.org]
[pool directory]
  • o-o-stable: 1.0+dfsg-7
  • oldstable: 1.0+dfsg-10
  • stable: 1.0+dfsg-11
  • testing: 1.0+dfsg-11
  • unstable: 1.0+dfsg-11
versioned links
  • 1.0+dfsg-7: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 1.0+dfsg-10: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
  • 1.0+dfsg-11: [.dsc, use dget on this link to retrieve source package] [changelog] [copyright] [rules] [control]
binaries
  • jaligner
action needed
Failed to analyze the VCS repository. Please troubleshoot and fix the issue. high
vcswatch reports that there is an error with this package's VCS, or the debian/changelog file inside it. Please check the error shown below and try to fix it. You might have to update the VCS URL in the debian/control file to point to the correct repository.

remote: Retry later fatal: unable to access 'https://salsa.debian.org/med-team/jaligner.git/': The requested URL returned error: 429
Created: 2023-07-16 Last update: 2026-08-21 13:31
lintian reports 1 warning normal
Lintian reports 1 warning about this package. You should make the package lintian clean getting rid of them.
Created: 2025-04-09 Last update: 2025-04-09 15:31
debian/patches: 1 patch to forward upstream low

Among the 2 debian patches available in version 1.0+dfsg-11 of the package, we noticed the following issues:

  • 1 patch where the metadata indicates that the patch has not yet been forwarded upstream. You should either forward the patch upstream or update the metadata to document its real status.
Created: 2023-02-26 Last update: 2023-07-17 09:01
Standards version of the package is outdated. wishlist
The package should be updated to follow the last version of Debian Policy (Standards-Version 4.7.4 instead of 4.6.2).
Created: 2024-04-07 Last update: 2026-03-31 15:01
news
[rss feed]
  • [2023-07-19] jaligner 1.0+dfsg-11 MIGRATED to testing (Debian testing watch)
  • [2023-07-16] Accepted jaligner 1.0+dfsg-11 (source) into unstable (Nilesh Patra)
  • [2023-01-22] jaligner 1.0+dfsg-10 MIGRATED to testing (Debian testing watch)
  • [2023-01-19] Accepted jaligner 1.0+dfsg-10 (source) into unstable (Andreas Tille)
  • [2022-11-04] jaligner 1.0+dfsg-9 MIGRATED to testing (Debian testing watch)
  • [2022-11-01] Accepted jaligner 1.0+dfsg-9 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2021-10-05] jaligner 1.0+dfsg-8 MIGRATED to testing (Debian testing watch)
  • [2021-10-01] Accepted jaligner 1.0+dfsg-8 (source) into unstable (Andreas Tille)
  • [2020-07-05] jaligner 1.0+dfsg-7 MIGRATED to testing (Debian testing watch)
  • [2020-07-03] Accepted jaligner 1.0+dfsg-7 (source) into unstable (Pranav Ballaney) (signed by: Andreas Tille)
  • [2018-12-21] jaligner 1.0+dfsg-6 MIGRATED to testing (Debian testing watch)
  • [2018-12-16] Accepted jaligner 1.0+dfsg-6 (source) into unstable (Andreas Tille)
  • [2018-07-19] jaligner 1.0+dfsg-5 MIGRATED to testing (Debian testing watch)
  • [2018-07-14] Accepted jaligner 1.0+dfsg-5 (source) into unstable (Andreas Tille)
  • [2016-10-07] Accepted jaligner 1.0+dfsg-4~bpo8+1 (source all) into jessie-backports (Andreas Tille)
  • [2016-07-17] jaligner 1.0+dfsg-4 MIGRATED to testing (Debian testing watch)
  • [2016-07-11] Accepted jaligner 1.0+dfsg-4 (source) into unstable (tony mancill) (signed by: Andreas Tille)
  • [2016-05-29] jaligner 1.0+dfsg-3 MIGRATED to testing (Debian testing watch)
  • [2016-05-23] Accepted jaligner 1.0+dfsg-3 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2016-05-10] jaligner 1.0+dfsg-2 MIGRATED to testing (Debian testing watch)
  • [2016-05-04] Accepted jaligner 1.0+dfsg-2 (source) into unstable (Michael R. Crusoe) (signed by: Michael Robin Crusoe)
  • [2015-12-14] Accepted jaligner 1.0+dfsg-1~bpo8+1 (source all) into jessie-backports, jessie-backports (Afif Elghraoui) (signed by: Andreas Tille)
  • [2015-09-08] jaligner 1.0+dfsg-1 MIGRATED to testing (Britney)
  • [2015-09-02] Accepted jaligner 1.0+dfsg-1 (source all) into unstable, unstable (Michael R. Crusoe) (signed by: Andreas Tille)
bugs [bug history graph]
  • all: 0
links
  • homepage
  • lintian (0, 1)
  • buildd: logs, reproducibility
  • popcon
  • browse source code
  • other distros
  • debian patches
  • debci
ubuntu Ubuntu logo [Information about Ubuntu for Debian Developers]
  • version: 1.0+dfsg-11build1

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