#!/usr/bin/make -f # DH_VERBOSE := 1 export LC_ALL=C.UTF-8 include /usr/share/dpkg/default.mk export DEB_BUILD_MAINT_OPTIONS = hardening=+all export DEB_CPPFLAGS_MAINT_APPEND += -DSIMDE_ENABLE_OPENMP export DEB_CPPFLAGS_MAINT_APPEND += -DSIMDE_ENABLE_NATIVE_ALIASES export DEB_CFLAGS_MAINT_APPEND += -fopenmp-simd -O3 export DEB_CXXFLAGS_MAINT_APPEND += -fopenmp-simd -O3 export PYBUILD_NAME=pyabpoa %: dh $@ --with=python3 --buildsystem=pybuild execute_after_dh_auto_build: ifeq ($(DEB_HOST_ARCH),amd64) set -e \ ; for SIMDE in avx2 avx sse4.1 ssse3 sse3 \ ; do CFLAGS="$(CFLAGS) -m$${SIMDE}" \ CXXFLAGS="$(CXXFLAGS) -m$${SIMDE}" \ dh_auto_build --buildsystem=makefile -- all \ ; mv -v bin/abpoa bin/abpoa.$${SIMDE} \ ; dh_auto_clean --buildsystem=makefile -- clean \ ; done endif dh_auto_build --buildsystem=makefile -- all mv -v bin/abpoa bin/abpoa.generic cp debian/abpoa-dispatch.sh bin/abpoa override_dh_auto_test: ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS))) # Tests from the README.md document ./bin/abpoa ./test_data/seq.fa > cons.fa ./bin/abpoa ./test_data/heter.fa > 2cons.fa ./bin/abpoa -r1 ./test_data/seq.fa > out.msa ./bin/abpoa -r2 ./test_data/seq.fa > out_cons.msa ./bin/abpoa -r3 ./test_data/seq.fa > out.gfa ./bin/abpoa -r4 ./test_data/seq.fa > out4.gfa cp out.gfa in.gfa cp out.msa in.msa ./bin/abpoa -i in.gfa ./test_data/seq.fa -r3 > out.gfa ./bin/abpoa -i in.msa ./test_data/seq.fa -r1 > out.msa ./bin/abpoa ./test_data/seq.fa -g poa.png > cons.fa ./bin/abpoa ./test_data/heter.fa -d2 endif override_dh_gencontrol: dh_gencontrol -- \ -Vsimde:Built-Using="$(shell dpkg-query -f '$${source:Package} (= $${source:Version}), ' -W "libsimde-dev")"