Source: abyss Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Michael R. Crusoe , Étienne Mollier Section: science Priority: optional Build-Depends: debhelper-compat (= 13), libboost-graph-dev, libopenmpi-dev, libsparsehash-dev, libtext-multimarkdown-perl , libsqlite3-dev, pkg-config, help2man, debhelper Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/abyss Vcs-Git: https://salsa.debian.org/med-team/abyss.git Homepage: https://github.com/bcgsc/abyss Rules-Requires-Root: no Package: abyss Architecture: any-amd64 arm64 mips64el ppc64el s390x ia64 ppc64 riscv64 sparc64 alpha Depends: make, ${shlibs:Depends}, ${misc:Depends}, ${perl:Depends}, bsdextrautils, # For openmpi error messages: openmpi-common, # for /usr/bin/orted and possibly other MPI components: openmpi-bin Description: de novo, parallel, sequence assembler for short reads ABySS is a de novo, parallel, sequence assembler that is designed for short reads. It may be used to assemble genome or transcriptome sequence data. Parallelization is achieved using MPI, OpenMP and pthread.