Source: assemblytics Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Section: science Priority: optional Build-Depends: debhelper-compat (= 13) Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/assemblytics Vcs-Git: https://salsa.debian.org/med-team/assemblytics.git Homepage: http://assemblytics.com/ Rules-Requires-Root: no Package: assemblytics Architecture: all Depends: ${misc:Depends}, ${perl:Depends}, python3, python3-numpy, r-base-core, r-cran-ggplot2, r-cran-plyr, r-cran-rcolorbrewer Recommends: mummer Description: detect and analyze structural variants from a genome assembly Assemblytics incorporates a unique anchor filtering approach to increase robustness to repetitive elements, and identifies six classes of variants based on their distinct alignment signatures. Assemblytics can be applied both to comparing aberrant genomes, such as human cancers, to a reference, or to identify differences between related species.