Source: biojava-live Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller , Andreas Tille , Olivier Sallou , Pierre Gruet Section: java Priority: optional Build-Depends: debhelper-compat (= 13), maven-debian-helper Build-Depends-Indep: default-jdk, junit4 , libcommons-dbcp-java, libjaxb-api-java, libjgrapht0.8-java, libjgrapht0.8-java-doc, libmaven-javadoc-plugin-java, libxerces2-java Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/biojava-live Vcs-Git: https://salsa.debian.org/med-team/biojava-live.git Homepage: https://www.biojava.org Rules-Requires-Root: no Package: libbiojava1.9-java Architecture: all Depends: ${misc:Depends}, ${maven:Depends} Suggests: libbiojava-java, libbiojava-java-doc, ${maven:OptionalDepends} Conflicts: libbiojava1.7-java Replaces: libbiojava1.7-java Description: Java API to biological data and applications (version 1.9) This package presents the Open Source Java API to biological databases and a series of mostly sequence-based algorithms. The APIs are not compatible between versions. In analogy to the dealing with shared libraries of the C language, the jar file of this package has the API version in its name. It is symbolically linked to the expected biojava.jar filename in the package libbiojava-java. This will help keeping multiple versions of the biojava API in parallel. Package: libbiojava-java Architecture: all Depends: libbiojava1.9-java, ${misc:Depends} Conflicts: libbiojava1.7-java Replaces: libbiojava1.7-java Description: Java API to biological data and applications (default version) BioJava is an open-source project dedicated to providing a Java framework for processing biological data. It includes objects for manipulating sequences, file parsers, DAS client and server support, access to BioSQL and Ensembl databases, and powerful analysis and statistical routines including a dynamic programming toolkit. . BioJava is provided by a vibrant community which meets annually at the Bioinformatics Open Source Conference (BOSC) that traditionally accompanies the Intelligent Systems in Molecular Biology (ISMB) meeting. Much like BioPerl, the employment of this library is valuable for everybody active in the field because of the many tricks of the trade one learns just by communicating on the mailing list. . This is a dependency package which should enable smooth upgrades to new versions. Package: libbiojava-java-doc Architecture: all Section: doc Depends: ${misc:Depends}, ${maven:DocDepends} Suggests: libbiojava-java, ${maven:DocOptionalDepends} Multi-Arch: foreign Description: [Biology] Documentation for BioJava BioJava is an open-source project dedicated to providing a Java framework for processing biological data. . This package contains the HTML documentation describing the API of BioJava which was generated automatically by JavaDoc.