Source: covtobed Maintainer: Debian Med Packaging Team Uploaders: Shayan Doust Section: science Priority: optional Build-Depends: debhelper-compat (= 13), libbamtools-dev, zlib1g-dev Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/covtobed Vcs-Git: https://salsa.debian.org/med-team/covtobed.git Homepage: https://github.com/telatin/covtobed Rules-Requires-Root: no Package: covtobed Architecture: any Depends: ${shlibs:Depends}, ${misc:Depends}, bamtools, zlib1g Description: convert the coverage track from a BAM file into a BED file Reads one (or more) alignment files (sorted BAM) and prints a BED with the coverage. It will join consecutive bases with the same coverage, and can be used to only print a BED file with the regions having a specific coverage range. Package: covtobed-examples Architecture: all Depends: ${misc:Depends} Recommends: covtobed Multi-Arch: foreign Description: example data and scripts for mindthegap Reads one (or more) alignment files (sorted BAM) and prints a BED with the coverage. It will join consecutive bases with the same coverage, and can be used to only print a BED file with the regions having a specific coverage range. . This package is meant to accommodate covtobed.