Source: examl Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Section: science Priority: optional Build-Depends: debhelper-compat (= 12), libopenmpi-dev, libsimde-dev Standards-Version: 4.5.0 Vcs-Browser: https://salsa.debian.org/med-team/examl Vcs-Git: https://salsa.debian.org/med-team/examl.git Homepage: https://github.com/stamatak/ExaML Rules-Requires-Root: no Package: examl Architecture: any Built-Using: ${simde:Built-Using} Depends: ${shlibs:Depends}, ${misc:Depends}, openmpi-bin Description: Exascale Maximum Likelihood (ExaML) code for phylogenetic inference Exascale Maximum Likelihood (ExaML) is a code for phylogenetic inference using MPI. This code implements the popular RAxML search algorithm for maximum likelihood based inference of phylogenetic trees. . ExaML is a strapped-down light-weight version of RAxML for phylogenetic inference on huge datasets. It can only execute some very basic functions and is intended for computer-savvy users that can write little perl-scripts and have experience using queue submission scripts for clusters. ExaML only implements the CAT and GAMMA models of rate heterogeneity for binary, DNA, and protein data. . ExaML uses a radically new MPI parallelization approach that yields improved parallel efficiency, in particular on partitioned multi-gene or whole-genome datasets. It also implements a new load balancing algorithm that yields better parallel efficiency. . It is up to 4 times faster than its predecessor RAxML-Light and scales to a larger number of processors.