Source: hilive
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 12),
               cmake,
               libboost-system-dev,
               libboost-filesystem-dev,
               libboost-iostreams-dev,
               libboost-program-options-dev,
               libhts-dev,
               libseqan2-dev,
               zlib1g-dev,
               liblz4-dev,
               chrpath,
               markdown
Standards-Version: 4.4.1
Vcs-Browser: https://salsa.debian.org/med-team/hilive
Vcs-Git: https://salsa.debian.org/med-team/hilive.git
Homepage: https://gitlab.com/rki_bioinformatics/HiLive2

Package: hilive
Architecture: any
Depends: ${shlibs:Depends},
         ${misc:Depends}
Description: realtime alignment of Illumina reads
 HiLive is a read mapping tool that maps Illumina HiSeq (or comparable)
 reads to a reference genome right in the moment when they are produced.
 This means, read mapping is finished as soon as the sequencer is
 finished generating the data.