Source: iqtree Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Kevin Murray Section: science Build-Depends: debhelper-compat (= 13), cmake, googletest, libboost-dev, libeigen3-dev, libncl-dev, libsimde-dev, libsprng2-dev, libyaml-cpp-dev, mpi-default-dev, zlib1g-dev, help2man, time, chrpath Standards-Version: 4.7.4 Vcs-Browser: https://salsa.debian.org/med-team/iqtree Vcs-Git: https://salsa.debian.org/med-team/iqtree.git Homepage: http://www.iqtree.org Rules-Requires-Root: no Package: iqtree Architecture: any Depends: ${shlibs:Depends}, ${misc:Depends} Description: efficient phylogenetic software by maximum likelihood IQ-TREE is a very efficient maximum likelihood phylogenetic software with following key features among others: . * A novel fast and effective stochastic algorithm to estimate maximum likelihood trees. IQ-TREE outperforms both RAxML and PhyML in terms of likelihood while requiring similar amount of computing time (see Nguyen et al., 2015) * An ultrafast bootstrap approximation to assess branch supports (see Minh et al., 2013). * A wide range of substitution models for binary, DNA, protein, codon, and morphological alignments. * Ultrafast model selection for all data types, 10 to 100 times faster than jModelTest and ProtTest. * Finding best partition scheme like PartitionFinder. * Partitioned models with mixed data types for phylogenomic (multi- gene) alignments, allowing for separate, proportional, or joint branch lengths among genes. * Supporting the phylogenetic likelihod library (PLL) (see Flouri et al., 2014)