#!/usr/bin/make -f # DH_VERBOSE := 1 export DEB_BUILD_MAINT_OPTIONS = hardening=+all include /usr/share/dpkg/default.mk mandir=$(CURDIR)/debian/$(DEB_SOURCE)/usr/share/man/man1/ %: dh $@ VARIANTS = omp serial mpi override_dh_auto_configure: $(foreach variant,$(VARIANTS),dh_auto_configure_$(variant)) override_dh_auto_build: $(foreach variant,$(VARIANTS),dh_auto_build_$(variant)) override_dh_auto_install: $(foreach variant,$(VARIANTS),dh_auto_install_$(variant)) override_dh_auto_clean: $(foreach variant,$(VARIANTS),dh_auto_clean_$(variant)) dh_auto_configure_mpi: dh_auto_configure -Bbuild.mpi -- -DIQTREE_FLAGS="mpi" dh_auto_configure_omp: dh_auto_configure -Bbuild.omp -- -DIQTREE_FLAGS="omp" dh_auto_configure_serial: dh_auto_configure -Bbuild.serial -- -DIQTREE_FLAGS="" dh_auto_build_%: dh_auto_build -Bbuild.$(subst dh_auto_build_,,$@) # restore the old naming to avoid name space conflict with serial build if [ -x build.omp/iqtree2 ] ; then mv build.omp/iqtree2 build.omp/iqtree2-omp ; fi dh_auto_install_%: if [ "$(subst dh_auto_install_,,$@)" != "omp" ] ; then dh_auto_install -Bbuild.$(subst dh_auto_install_,,$@); fi override_dh_install: dh_install find debian -name iqtree2-mpi -exec chrpath --delete \{\} \; find debian -name iqtree2-omp -exec chrpath --delete \{\} \; dh_auto_clean_%: dh_auto_clean -Bbuild.$(subst dh_auto_clean_,,$@) override_dh_installexamples: # somehow the example config is installed in /usr by cmake find debian/$(DEB_SOURCE) -name example.cf -delete dh_installexamples # remove example files in unusual dir rm -f debian/*/usr/models.nex rm -f debian/*/usr/example.[np][eh][xy] override_dh_installman: mkdir -p $(mandir) help2man --no-info --no-discard-stderr --help-option="-h" \ --name='efficient phylogenetic software by maximum likelihood' \ --version-string="$(DEB_VERSION_UPSTREAM)" $(CURDIR)/debian/$(DEB_SOURCE)/usr/bin/iqtree2 > $(mandir)/iqtree2.1 help2man --no-info --no-discard-stderr --help-option="-h" \ --name='efficient phylogenetic software by maximum likelihood (multiprocessor version)' \ --version-string="$(DEB_VERSION_UPSTREAM)" $(CURDIR)/debian/$(DEB_SOURCE)/usr/bin/iqtree2-omp > $(mandir)/iqtree2-omp.1 help2man --no-info --no-discard-stderr --help-option="-h" \ --name='efficient phylogenetic software by maximum likelihood (multiprocessor version)' \ --version-string="$(DEB_VERSION_UPSTREAM)" $(CURDIR)/debian/$(DEB_SOURCE)/usr/bin/iqtree2-mpi > $(mandir)/iqtree2-mpi.1 override_dh_auto_test: ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS))) # use only the first example for build time test to save time on autobuilders # if [ "`find $(CURDIR) -name iqtree -type f -executable`" = "" ] ; then \ # iqtreeomp=`find $(CURDIR) -name iqtree-omp -type f -executable` ; \ # ln -s iqtree-omp `dirname $$iqtreeomp`/iqtree ; \ # fi ifneq ($(shell nproc), 1) sed '/ myprefix/,$$d' debian/Documents_source/example.sh > example.short echo 'time $(CURDIR)/build.omp/iqtree2-omp -s example.phy -redo' >> example.short time sh example.short rm example.short endif endif