Format: https://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Name: libpwizlite Upstream-Contact: Filippo Rusconi Source: https://salsa.debian.org/debichem-team/libpwizlite Files: src/pwiz/data/common/CVTranslator.*pp src/pwiz/Version.hpp src/pwiz/data/common/ParamTypes.*pp src/pwiz/data/common/cv.*pp src/pwiz/data/common/cv.inl src/pwiz/data/common/diff_std.*pp src/pwiz/data/msdata/BinaryDataEncoder.*pp src/pwiz/data/msdata/ChromatogramListBase.hpp src/pwiz/data/msdata/ChromatogramList_mzML.*pp src/pwiz/data/msdata/DefaultReaderList.*pp src/pwiz/data/msdata/Diff.hpp src/pwiz/data/msdata/IO.*pp src/pwiz/data/msdata/IO-FRusconi*.cpp src/pwiz/data/msdata/LegacyAdapter.*pp src/pwiz/data/msdata/MSData.*pp src/pwiz/data/msdata/MSDataFile.*pp src/pwiz/data/msdata/Reader.*pp src/pwiz/data/msdata/References.*pp src/pwiz/data/msdata/SHA1OutputObserver.hpp src/pwiz/data/msdata/Serializer_mzML.*pp src/pwiz/data/msdata/Serializer_mzXML.*pp src/pwiz/data/msdata/SpectrumInfo.hpp src/pwiz/data/msdata/SpectrumListBase.hpp src/pwiz/data/msdata/SpectrumListWrapper.hpp src/pwiz/data/msdata/SpectrumList_mzML.*pp src/pwiz/data/msdata/SpectrumList_mzXML.*pp src/pwiz/data/msdata/TextWriter.hpp src/pwiz/data/msdata/Version.*pp src/pwiz/data/msdata/examples.hpp src/pwiz/utility/minimxml/XMLWriter.*pp src/pwiz/utility/math/round.hpp src/pwiz/utility/misc/IterationListener.cpp src/pwiz/utility/misc/endian.hpp src/pwiz/utility/misc/IterationListener.hpp src/pwiz/utility/misc/IntegerSet.hpp src/pwiz/utility/misc/IntegerSet.cpp src/pwiz/utility/misc/SHA1Calculator.*pp src/pwiz/data/common/obo.hpp Copyright: 2007, 2008, 2009, Spielberg Family Center for Applied Proteomics License: Apache-2.0 Files: src/pwiz/data/misc/FrequencyDataTestData.hpp src/pwiz/data/misc/MinimumPepXML.hpp src/pwiz/data/misc/PeakData.hpp src/pwiz/data/msdata/SpectrumInfo.cpp src/pwiz/data/msdata/SpectrumIterator.hpp src/pwiz/utility/chemistry/IsotopeEnvelopeEstimator.hpp src/pwiz/utility/math/LinearSolver.hpp src/pwiz/utility/math/MatchedFilter.hpp src/pwiz/utility/misc/MSIHandler.hpp src/pwiz/utility/misc/SHA1_ostream.hpp src/pwiz/utility/misc/TabReader.hpp src/pwiz/utility/misc/Timer.hpp Copyright: 2007, 2008, 2009 Spielberg Family Center for Applied Proteomics 2007, 2008, 2009 Cedars Sinai Medical Center, Los Angeles, California License: Apache-2.0 Files: src/pwiz/utility/misc/CharIndexedVector.hpp src/pwiz/utility/misc/Filesystem-303.cpp src/pwiz/utility/misc/Filesystem-reduced-to-min-for-build-in-win10-mingw64.cpp Copyright: 2008 Vanderbilt University - Nashville, TN 37232 2008 Spielberg Family Center for Applied Proteomics 2003 Cedars Sinai Medical Center, Los Angeles, California 90048 License: Apache-2.0 Files: src/pwiz/data/msdata/SpectrumList_BTDX.*pp src/pwiz/data/msdata/SpectrumList_MGF.*pp src/pwiz/data/msdata/SpectrumList_MSn.*pp src/pwiz/utility/misc/Container.hpp src/pwiz/utility/misc/Exception.hpp src/pwiz/utility/misc/Export.hpp src/pwiz/utility/misc/Filesystem.*pp src/pwiz/utility/misc/Stream.hpp src/pwiz/utility/misc/String.hpp src/pwiz/utility/misc/optimized_lexical_cast.hpp src/pwiz/utility/misc/virtual_map.hpp Copyright: 2007, 2008, 2009, Spielberg Family Center for Applied Proteomics 2008, 2010, 2011, 2014, Vanderbilt University - Nashville, TN 37232 2017, 2009, Matt Chambers License: Apache-2.0 Files: src/pwiz/data/msdata/mzmlb/Connection_mzMLb.*pp Copyright: 2017 biospi Laboratory, University of Bristol, UK License: Apache-2.0 Files: src/pwiz/utility/misc/String.cpp Copyright: 2021 Matt Chambers License: Apache-2.0 Files: src/pwiz/data/msdata/Index_mzML.*pp src/pwiz/data/msdata/Serializer_MGF.*pp src/pwiz/data/msdata/Serializer_MSn.*pp src/pwiz/data/msdata/SpectrumWorkerThreads.*pp src/pwiz/utility/misc/Environment.hpp src/pwiz/utility/misc/BinaryData.*pp src/pwiz/utility/misc/DateTime.hpp src/pwiz/utility/misc/Std.hpp src/pwiz/utility/misc/shared_map.hpp src/pwiz/utility/misc/Singleton.hpp src/pwiz/data/common/BinaryIndexStream.hpp src/pwiz/data/common/Index.hpp src/pwiz/data/common/MemoryIndex.hpp src/pwiz/data/common/Unimod.hpp src/pwiz/data/msdata/MSDataMerger.hpp src/pwiz/data/msdata/MemoryMRUCache.hpp src/pwiz/data/msdata/SpectrumListCache.hpp src/pwiz/utility/misc/COMInitializer.hpp src/pwiz/utility/misc/ClickwrapPrompter.hpp src/pwiz/utility/misc/Once.hpp src/pwiz/utility/misc/VendorReaderTestHarness.hpp src/pwiz/utility/misc/cpp_cli_utilities.hpp Copyright: 2008, 2010, 2011, 2014, Vanderbilt University - Nashville, TN 37232 2017, 2009, Matt Chambers License: Apache-2.0 Files: src/pwiz/utility/findmf/base/base/base.hpp src/pwiz/utility/findmf/base/base/constants.hpp src/pwiz/utility/findmf/base/base/copyif.hpp src/pwiz/utility/findmf/base/base/diff.hpp src/pwiz/utility/findmf/base/base/interpolate.hpp src/pwiz/utility/findmf/base/base/scale.hpp src/pwiz/utility/findmf/base/base/utilities/base.hpp src/pwiz/utility/findmf/base/base/utilities/interpolation.hpp src/pwiz/utility/findmf/base/filter/filter.hpp src/pwiz/utility/findmf/base/filter/gaussfilter.hpp src/pwiz/utility/findmf/base/filter/utilities/gauss.hpp src/pwiz/utility/findmf/base/filter/utilities/preparedata.hpp src/pwiz/utility/findmf/base/resample/bin1d.hpp src/pwiz/utility/findmf/base/resample/breakspec.hpp src/pwiz/utility/findmf/base/resample/determinebinwidth.hpp src/pwiz/utility/findmf/base/resample/masscomparefunctors.hpp src/pwiz/utility/findmf/base/resample/utilities/determinebinwidth.hpp Copyright: ETH Zurich License: Apache-2.0 Files: src/pwiz/data/msdata/MSNumpress.*pp Copyright: 2013, Johan Teleman License: Apache-2.0 Files: src/pwiz/data/msdata/Serializer_mz5.hpp src/pwiz/data/msdata/ChromatogramList_mz5.hpp src/pwiz/data/msdata/SpectrumList_mz5.hpp Copyright: 2011 Proteomics Center Children's Hospital Boston, Boston, MA 02135 License: Apache-2.0 Files: src/pwiz/utility/minimxml/SAXParser.*pp Copyright: 2008, 2011, Insilicos LLC All Rights Reserved 2007, 2008, 2009, Spielberg Family Center for Applied Proteomics License: Apache-2.0 Files: src/pwiz/utility/misc/unit.hpp src/pwiz/utility/misc/Base64.*pp src/pwiz/utility/chemistry/Chemistry.hpp src/pwiz/data/misc/CalibrationParameters.hpp Copyright: 2005, 2006, Louis Warschaw Prostate Cancer Center License: Apache-2.0 Files: src/pwiz/utility/chemistry/MZTolerance.hpp src/pwiz/utility/math/OrderedPair.hpp src/pwiz/utility/misc/almost_equal.hpp Copyright: 2009, Center for Applied Molecular Medicine, University of Southern California, Los Angeles, CA License: Apache-2.0 Files: src/pwiz/data/misc/SampleDatum.hpp src/pwiz/data/misc/FrequencyData.hpp src/pwiz/utility/chemistry/ChemistryData.hpp src/pwiz/utility/chemistry/Ion.hpp src/pwiz/utility/chemistry/IsotopeCalculator.hpp src/pwiz/utility/chemistry/IsotopeTable.hpp src/pwiz/utility/math/LinearLeastSquares.hpp src/pwiz/utility/math/Parabola.hpp src/pwiz/utility/math/Stats.hpp src/pwiz/utility/math/Types.hpp src/pwiz/utility/math/erf.hpp src/pwiz/utility/math/qr.hpp src/pwiz/utility/misc/Image.hpp Copyright: 2006, Louis Warschaw Prostate Cancer Center 2006 Cedars Sinai Medical Center, Los Angeles, California License: Apache-2.0 Files: src/pwiz/data/msdata/RAMPAdapter.hpp Copyright: 2008 Spielberg Family Center for Applied Proteomics 2008 Louis Warschaw Prostate Cancer Center License: Apache-2.0 Files: src/pwiz/utility/math/HouseholderQR.hpp Copyright: Robert Burke License: Apache-2.0 Files: src/pwiz/analysis/demux/DemuxDataProcessingStrings.hpp src/pwiz/analysis/spectrum_processing/SpectrumList_Demux.hpp Copyright: Jarrett Egertson License: Apache-2.0 Files: src/pwiz/data/msdata/SpectrumListBase.cpp src/pwiz/utility/chemistry/MzMobilityWindow.hpp Copyright: 2019 2020 Matt Chambers License: Apache-2.0 License: Apache-2.0 Apache License Version 2.0 . Licensed under the Apache License, Version 2.0 (the "License"); you may not use this file except in compliance with the License. You may obtain a copy of the License at . http://www.apache.org/licenses/LICENSE-2.0 . Unless required by applicable law or agreed to in writing, software distributed under the License is distributed on an "AS IS" BASIS, WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied. See the License for the specific language governing permissions and limitations under the License. . On Debian systems you can read the full text of the Apache 2.0 LICENSE at /usr/share/common-licenses/Apache-2.0.License: Apache-2.0 Files: src/pwiz/utility/misc/SHA1.* Copyright: Dominik Reichl License: Public-domain . This software is in the public domain. Files: src/pwiz/utility/misc/automation_vector.h Copyright: Andrei Alexandrescu License: Public-domain-email http://erdani.org/publications/adapting_automation_arrays.html Sent an email to ask for a copyright notice. . Date: Wed, 3 Jun 2020 16:45:19 -0400 From: Andrei Alexandrescu To: Filippo Rusconi Cc: Andrei Alexandrescu Subject: Re: Copyright notice for your work ? . Public domain. You can use this email as confirmation. Have fun! . On Wed, Jun 3, 2020 at 1:32 PM Filippo Rusconi < filippo.rusconi@universite-paris-saclay.fr> wrote: . > Greetings, Mr Alexandrescu, > > I am currently packaging a software for Debian GNU/Linux and am seeing > that some > code from http://erdani.org/publications/adapting_automation_arrays.html > is > included in that software. > > Could you please tell me what is the license of that page ? Is the code > freely > redistributable with a Free Software license or is it in the public domain > ? > > Looking forward to your answer, and with my best regards, > > Filippo Rusconi > > -- > > ⢀⣴⠾⠻⢶⣦⠀ Filippo Rusconi, PhD > ⣾⠁⢠⠒⠀⣿⡁ Research scientist at CNRS > ⢿⡄⠘⠷⠚⠋⠀ Debian Developer > ⠈⠳⣄⠀⠀⠀⠀ http://msxpertsuite.org > http://www.debian.org Files: src/pwiz/utility/misc/random_access_compressed_ifstream.*pp Copyright: 2008, 2011, Insilicos LLC All Rights Reserved 1995-2005 Jean-loup Gailly 2005 Mark Adler License: Zlib License: Zlib . This software is provided 'as-is', without any express or implied warranty. In no event will the authors be held liable for any damages arising from the use of this software. . Permission is granted to anyone to use this software for any purpose, including commercial applications, and to alter it and redistribute it freely, subject to the following restrictions: . 1. The origin of this software must not be misrepresented; you must not claim that you wrote the original software. If you use this software in a product, an acknowledgment in the product documentation would be appreciated but is not required. 2. Altered source versions must be plainly marked as such, and must not be misrepresented as being the original software. 3. This notice may not be removed or altered from any source distribution. Files: src/pwiz/utility/misc/mru_list.hpp Copyright: 2003-2008, Joaquin M Lopez Munoz License: Boost-1.0 Files: src/pwiz/utility/math/MatrixInverse.hpp Copyright: 0000, No Author License: Boost-1.0 License: Boost-1.0 . Permission is hereby granted, free of charge, to any person or organization obtaining a copy of the software and accompanying documentation covered by this license (the "Software") to use, reproduce, display, distribute, execute, and transmit the Software, and to prepare derivative works of the Software, and to permit third-parties to whom the Software is furnished to do so, all subject to the following: . The copyright notices in the Software and this entire statement, including the above license grant, this restriction and the following disclaimer, must be included in all copies of the Software, in whole or in part, and all derivative works of the Software, unless such copies or derivative works are solely in the form of machine-executable object code generated by a source language processor. . THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, TITLE AND NON-INFRINGEMENT. IN NO EVENT SHALL THE COPYRIGHT HOLDERS OR ANYONE DISTRIBUTING THE SOFTWARE BE LIABLE FOR ANY DAMAGES OR OTHER LIABILITY, WHETHER IN CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE SOFTWARE. Files: src/boost/foreach_field.hpp Copyright: 2009 Chris Purcell License: Boost-1.0 Files: src/boost/utility/detail/member_dereference.hpp src/boost/utility/detail/singleton_manager.hpp src/boost/utility/detail/restricted.hpp src/boost/utility/thread_specific_singleton.hpp src/boost/utility/mutexed_singleton.hpp src/boost/utility/singleton.hpp Copyright: 2007 Tobias Schwinger License: Boost-1.0 Files: src/boost/enum.hpp src/boost/enum/bitfield.hpp src/boost/enum/iterator.hpp src/boost/enum/macros.hpp src/boost/enum/base.hpp Copyright: 2005 Frank Laub License: Boost-1.0 Files: src/boost/nowide/convert.hpp src/boost/nowide/windows.hpp src/boost/nowide/config.hpp src/boost/nowide/cstdlib.hpp src/boost/nowide/filebuf.hpp src/boost/nowide/iostream.hpp src/boost/nowide/system.hpp src/boost/nowide/cenv.hpp src/boost/nowide/stackstring.hpp src/boost/nowide/fstream.hpp src/boost/nowide/cstdio.hpp src/boost/nowide/args.hpp Copyright: 2012 Artyom Beilis (Tonkikh) License: Boost-1.0 Files: src/boost/iostreams/arbitrary_positional_facade.hpp src/boost/iostreams/filter/base64.hpp Copyright: 2006, 2007 Takeshi Mouri License: Boost-1.0 Files: CMakeLists.txt CMakeStuff/* src/CMakeLists.txt .gitignore maintainer-scripts/extract-files-from-proteowizard-source-tree.sh Copyright: 2020 Filippo Rusconi License: GPL-3+ Files: debian/* Copyright: 2020 Filippo Rusconi License: GPL-3+ License: GPL-3+ This package is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. . This package is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. . You should have received a copy of the GNU General Public License along with this program. If not, see . On Debian systems, the complete text of the GNU General Public License version 2 can be found in "/usr/share/common-licenses/GPL-3".