libseqlib (1.2.0+dfsg-11) unstable; urgency=medium * d/clean: new: cleanup leftovers. (Closes: #1047821) -- Étienne Mollier Thu, 14 Dec 2023 23:01:06 +0100 libseqlib (1.2.0+dfsg-10) unstable; urgency=medium * d/libseqlib2.symbols.amd64: update. Mark symbols optimized out by LTO as optional. This has the side effect of resolving build failures with Gcc 13. (Closes: #1015520, #1037739) * d/control: declare compliance to standards version 4.6.2. -- Étienne Mollier Tue, 18 Jul 2023 15:56:08 +0200 libseqlib (1.2.0+dfsg-9) unstable; urgency=medium * d/control: add myself to uploaders. * d/libseqlib2.symbols.amd64: refresh list of optional symbols. Closes: #1012992 * Standards-Version: 4.6.1 (routine-update) -- Étienne Mollier Wed, 13 Jul 2022 07:34:09 +0200 libseqlib (1.2.0+dfsg-8) unstable; urgency=medium * Provide symbols file only for amd64 to reduce maintenance burden -- Andreas Tille Sun, 21 Nov 2021 06:30:55 +0100 libseqlib (1.2.0+dfsg-7) unstable; urgency=medium * Fix symbols file Closes: #997450 -- Andreas Tille Mon, 01 Nov 2021 16:53:01 +0100 libseqlib (1.2.0+dfsg-6) unstable; urgency=medium * Really fix watch file -- Andreas Tille Tue, 31 Aug 2021 21:30:32 +0200 libseqlib (1.2.0+dfsg-5) unstable; urgency=medium * Fix watchfile to detect new versions on github (routine-update) * Standards-Version: 4.6.0 (routine-update) -- Andreas Tille Sun, 22 Aug 2021 09:18:27 +0200 libseqlib (1.2.0+dfsg-4) unstable; urgency=medium * Refresh symbols again for s390x built with -O3 -- Gianfranco Costamagna Sat, 16 Jan 2021 12:35:41 +0100 libseqlib (1.2.0+dfsg-3) unstable; urgency=medium * Refresh symbols file for new release, and mark some symbols as optional -- Gianfranco Costamagna Fri, 15 Jan 2021 18:44:09 +0100 libseqlib (1.2.0+dfsg-2) unstable; urgency=medium * Source-only upload -- Andreas Tille Fri, 15 Jan 2021 11:32:37 +0100 libseqlib (1.2.0+dfsg-1) unstable; urgency=medium * New upstream version Closes: #976414 [ Michael R. Crusoe ] * Snapshot from upstream. * Refresh patches * build-deps: libbz2-dev [ Andreas Tille ] * Standards-Version: 4.5.1 (routine-update) * Remove automatically generated automake files * Versioned Build-Depends: libfml-dev (>= 0.1+git20190320.b499514) * Bump SOVERSION due to ABI change * Remove unused lintian override -- Andreas Tille Fri, 08 Jan 2021 13:50:01 +0100 libseqlib (1.1.2+dfsg-9) unstable; urgency=medium * Team upload. * More symbols updates. * Mark most of Debian's patches as not appropriate for forwarding to upstream. -- Michael R. Crusoe Mon, 26 Oct 2020 16:51:53 +0100 libseqlib (1.1.2+dfsg-8) unstable; urgency=medium * Team upload. * Switch from libcurl4-openssl-dev to libcurl4-gnutls-dev for libhts compatability. -- Michael R. Crusoe Mon, 26 Oct 2020 15:14:18 +0100 libseqlib (1.1.2+dfsg-7) unstable; urgency=medium [ Michael R. Crusoe ] * Team upload. * Rules-Requires-Root: no * Mark binary packages as Multi-Arch: same * debhelper-compat 13 (routine-update) * Add salsa-ci file (routine-update) [ Michael R. Crusoe ] * Set upstream metadata fields: Repository, Repository-Browse. -- Michael R. Crusoe Sat, 24 Oct 2020 17:20:21 +0200 libseqlib (1.1.2+dfsg-6) unstable; urgency=medium * Team upload. * Standards-Version: 4.5.0 (routine-update) * Set upstream metadata fields: Bug-Submit. * debian/control: use ${devlibs:Depends} for the -dev package * Properly link the shared library against libjsoncpp, libfml, ssw, & htslib * Modified use of pkg-config to be friendly for cross-building this package * Use pkg-kde-tools to manage the symbols -- Michael R. Crusoe Sat, 15 Feb 2020 18:48:43 +0100 libseqlib (1.1.2+dfsg-5) unstable; urgency=medium * Avoid using non-public HTSlib headers and functions and do not (Build-)Depend libhts-private-dev Closes: #946924 * Standards-Version: 4.4.1 * Set upstream metadata fields: Bug-Database. * Refresh symbols -- Andreas Tille Wed, 18 Dec 2019 14:17:13 +0100 libseqlib (1.1.2+dfsg-4) unstable; urgency=medium * Adapt symbols to new version of gcc Closes: #925759 * debhelper-compat 12 * Standards-Version: 4.4.0 * libseqlib-dev: Depends: libssw-dev * Add lintian-overrides for libraries not found by pkgconfig -- Andreas Tille Tue, 20 Aug 2019 15:52:14 +0200 libseqlib (1.1.2+dfsg-3) unstable; urgency=medium * Adapt symbols to new version of gcc Closes: #923382 -- Andreas Tille Wed, 27 Feb 2019 10:48:25 +0100 libseqlib (1.1.2+dfsg-2) unstable; urgency=medium * Adapt symbols file to new gcc-8 Closes: #906486 * Standards-Version: 4.2.0 -- Andreas Tille Sat, 18 Aug 2018 12:26:38 +0200 libseqlib (1.1.2+dfsg-1) unstable; urgency=medium * Fix watch file * Add symbols file * New upstream version * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.4 * Bump ABI version due to upstream changes (see https://github.com/walaj/SeqLib/issues/24 ) -- Andreas Tille Wed, 23 May 2018 17:35:19 +0200 libseqlib (1.1.1+dfsg-5) unstable; urgency=medium [ Adam Conrad ] * Add missing -lz to pkg-config for linking with zlib Closes: #893192 -- Andreas Tille Sat, 17 Mar 2018 10:51:57 +0100 libseqlib (1.1.1+dfsg-4) unstable; urgency=medium * Make sure also private headers of htslib will be installed and usable since these are used in libseqlib-dev Closes: #891745 * Standards-Version: 4.1.3 * debhelper 11 -- Andreas Tille Mon, 05 Mar 2018 16:25:15 +0100 libseqlib (1.1.1+dfsg-3) unstable; urgency=medium * Remove liblzma-dev again since it is only used for dist target * Build-Depends: libhts-private-dev since libhts-dev does not provide private cran headers any more (see bug #881170) * Explicitly use -I/usr/include/htslib instead of pkg-config in libhts-dev since upstream insisted that the cram headers are private (see bug #881359) * d/rules: do not parse d/changelog * Standards-Version: 4.1.2 -- Andreas Tille Sun, 10 Dec 2017 14:24:34 +0100 libseqlib (1.1.1+dfsg-2) unstable; urgency=medium * Build-Depends: liblzma-dev * Explicitly add -I/usr/include -- Andreas Tille Sun, 18 Jun 2017 10:20:17 +0200 libseqlib (1.1.1+dfsg-1) experimental; urgency=medium * Initial release (Closes: #854774) -- Andreas Tille Fri, 10 Feb 2017 10:16:57 +0100