Source: libsonlib
Standards-Version: 4.7.4
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:
 Andreas Tille <tille@debian.org>,
Priority: optional
Section: science
Build-Depends:
 debhelper-compat (= 14),
 libbz2-dev,
 libquicktree-dev,
 libtokyocabinet-dev,
 zlib1g-dev,
Vcs-Browser: https://salsa.debian.org/med-team/libsonlib
Vcs-Git: https://salsa.debian.org/med-team/libsonlib.git
Homepage: https://github.com/benedictpaten/sonLib

Package: libsonlib1
Architecture: any
Multi-Arch: same
Section: libs
Depends:
 ${misc:Depends},
 ${shlibs:Depends},
Description: compact C/Python library for sequence analysis in bioinformatics
 SonLib is a small general purpose library for C and Python for sequence
 analysis with focus on bioinformatics. This package provides the shared
 library.

Package: libsonlib-dev
Architecture: any
Multi-Arch: same
Section: libdevel
Depends:
 libquicktree-dev,
 libsonlib1 (= ${binary:Version}),
 ${misc:Depends},
 ${shlibs:Depends},
Description: compact C/Python library for sequence analysis in bioinformatics (dev)
 SonLib is a small general purpose library for C and Python for sequence
 analysis with focus on bioinformatics.
 .
 For basic data-structures in C it contains:
 .
  * array lists (automatically resizing)
  * hashes
  * sets (backed by hashes)
  * sorted sets (backed by an AVL tree)
  * containers (for putting primitives into the above data-structures)
  * better string functions
  * simple exception mechanism
  * logging functions
 .
 For bioinformatic data-structures it contains:
 .
  * Fasta I/O functions
  * MAF I/O functions
  * Newick tree I/O functions