Source: mash Maintainer: Debian Med Packaging Team Uploaders: Sascha Steinbiss Section: science Priority: optional Build-Depends: debhelper (>= 13), debhelper-compat (= 13), capnproto, libcapnp-dev, libgsl-dev, zlib1g-dev, libmurmurhash-dev, pkg-config Build-Depends-Indep: python3-sphinx, libjs-mathjax, dh-sequence-sphinxdoc Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/mash Vcs-Git: https://salsa.debian.org/med-team/mash.git Homepage: https://mash.readthedocs.io Rules-Requires-Root: no Package: mash Architecture: amd64 arm64 mips64el ppc64el s390x alpha ppc64 riscv64 Depends: ${shlibs:Depends}, ${misc:Depends} Description: fast genome and metagenome distance estimation using MinHash Mash uses MinHash locality-sensitive hashing to reduce large biosequences to a representative sketch and rapidly estimate pairwise distances between genomes or metagenomes. Mash sketch databases effectively delineate known species boundaries, allow construction of approximate phylogenies, and can be searched in seconds using assembled genomes or raw sequencing runs from Illumina, Pacific Biosciences, and Oxford Nanopore. For metagenomics, Mash scales to thousands of samples and can replicate Human Microbiome Project and Global Ocean Survey results in a fraction of the time. Package: libmash-dev Architecture: amd64 arm64 mips64el ppc64el s390x alpha ppc64 riscv64 Section: libdevel Depends: ${shlibs:Depends}, ${misc:Depends} Description: development headers and static library for Mash This package contains C++ development headers and a static library to build custom programs utilizing Mash, a MinHash based genome distance estimator. Package: mash-doc Architecture: all Multi-Arch: foreign Section: doc Depends: ${misc:Depends}, ${sphinxdoc:Depends}, libjs-mathjax Built-Using: ${sphinxdoc:Built-Using} Description: documentation for Mash This package contains further documentation (tutorials, explanations, etc.) for Mash, a MinHash based genome distance estimator. The documentation is provided in HTML format.