Source: mcaller
Section: science
Priority: optional
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Steffen Moeller <moeller@debian.org>
Build-Depends: debhelper-compat (= 13),
               dh-python,
               python3-all,
               python3-setuptools,
               python3-seaborn,
               python3-biopython,
               python3-numpy,
               python3-sklearn
Standards-Version: 4.6.0
Vcs-Browser: https://salsa.debian.org/med-team/mcaller
Vcs-Git: https://salsa.debian.org/med-team/mcaller.git
Homepage: https://github.com/al-mcintyre/mCaller
Testsuite: autopkgtest-pkg-python
Rules-Requires-Root: no

Package: mcaller
Architecture: all
Depends: python3,
         ${python3:Depends},
         ${misc:Depends},
         python3-sklearn,
         python3-h5py,
         python3-biopython,
         python3-matplotlib,
         python3-seaborn,
         python3-numpy,
         python3-pysam,
         python3-scipy,
         python3-pandas
Recommends:
         nanopolish|poretools
Suggests:
         graphmap,
         bwa
Description: find methylation in nanopore reads
    H
    |
  H-C-aller
    |
    H
 .
 This program is designed to call m6A from nanopore data using the
 differences between measured and expected currents.