Source: mmseqs2 Standards-Version: 4.7.2 Maintainer: Debian Med Packaging Team Uploaders: Shayan Doust , Section: science Priority: optional Build-Depends: debhelper-compat (= 13), Build-Depends-Arch: cmake, architecture-is-64-bit, architecture-is-little-endian, libgzstream-dev, libzstd-dev, zlib1g-dev, libbz2-dev, libsimde-dev, libxxhash-dev, Vcs-Browser: https://salsa.debian.org/med-team/mmseqs2 Vcs-Git: https://salsa.debian.org/med-team/mmseqs2.git Homepage: https://github.com/soedinglab/MMseqs2 Rules-Requires-Root: no Package: mmseqs2 Architecture: any Depends: ${shlibs:Depends}, ${misc:Depends}, Built-Using: ${simde:Built-Using}, Description: ultra fast and sensitive protein search and clustering MMseqs2 (Many-against-Many sequence searching) is a software suite to search and cluster huge proteins/nucleotide sequence sets. MMseqs2 is open source GPL-licensed software implemented in C++ for Linux, MacOS, and (as beta version, via cygwin) Windows. The software is designed to run on multiple cores and servers and exhibits very good scalability. MMseqs2 can run 10000 times faster than BLAST. At 100 times its speed it achieves almost the same sensitivity. It can perform profile searches with the same sensitivity as PSI-BLAST at over 400 times its speed. Package: mmseqs2-examples Architecture: all Multi-Arch: foreign Depends: ${misc:Depends}, Recommends: mmseqs2, Description: optional resources for the mmseqs2 package MMseqs2 (Many-against-Many sequence searching) is a software suite to search and cluster huge proteins/nucleotide sequence sets. MMseqs2 is open source GPL-licensed software implemented in C++ for Linux, MacOS, and (as beta version, via cygwim) Windows. The software is designed to run on multiple cores and servers and exhibits very good scalability. MMseqs2 can run 10000 times faster than BLAST. At 100 times its speed it achieves almost the same sensitivity. It can perform profile searches with the same sensitivity as PSI-BLAST at over 400 times its speed.