Source: nanopolish
Standards-Version: 4.7.4
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:
 Andreas Tille <tille@debian.org>,
Section: science
Build-Depends:
 debhelper-compat (= 13),
 dh-sequence-python3,
 python3,
 zlib1g-dev,
 libfast5-dev,
 libhts-dev,
 libeigen3-dev,
 libminimap2-dev,
 libstreamvbyte-dev,
 libslow5-dev,
Vcs-Browser: https://salsa.debian.org/med-team/nanopolish
Vcs-Git: https://salsa.debian.org/med-team/nanopolish.git
Homepage: https://github.com/jts/nanopolish

Package: nanopolish
Architecture: any
Depends:
 ${shlibs:Depends},
 ${misc:Depends},
 ${python3:Depends},
 ${perl:Depends},
Recommends:
 python3-biopython,
 python3-pysam,
Suggests:
 perl,
 make,
Description: consensus caller for nanopore sequencing data
 Nanopolish uses a signal-level hidden Markov model for consensus calling
 of nanopore genome sequencing data. It can perform signal-level analysis
 of Oxford Nanopore sequencing data. Nanopolish can calculate an improved
 consensus sequence for a draft genome assembly, detect base
 modifications, call SNPs and indels with respect to a reference genome
 and more.