Source: ncbi-vdb Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Aaron M. Ucko Section: science Priority: optional Build-Depends: debhelper-compat (= 13), d-shlibs (>= 0.104) Build-Depends-Arch: cmake, libbz2-dev, libxml2-dev, libmagic-dev, libmbedtls-dev (>= 3), zlib1g-dev, libzstd-dev, flex, bison, python3, doxygen, graphviz, chrpath Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/ncbi-vdb Vcs-Git: https://salsa.debian.org/med-team/ncbi-vdb.git Homepage: https://github.com/ncbi/ncbi-vdb Rules-Requires-Root: no Package: libncbi-vdb3 Architecture: amd64 arm64 x32 Multi-Arch: same Section: libs Depends: ${shlibs:Depends}, ${misc:Depends}, ncbi-vdb-data (>= ${source:Version}) Breaks: sra-toolkit (<< 2.11~) Description: libraries for using data in the INSDC Sequence Read Archives The (US) National Center for Biotechnology Information (NCBI)'s Virtual/Vertical Database (VDB) is a highly compressed column-oriented data warehousing technology developed initially to address the needs of the Sequence Read Archive (SRA). It is unique in that it builds databases from smaller parts that can function independently as _documents_, supports effective and efficient compression, supports encryption while remaining encrypted on disk, transparent distribution and remote access. . This package contains a runtime library for reading VDB data. Package: libncbi-vdb-dev Architecture: amd64 arm64 x32 Multi-Arch: same Section: libdevel Depends: ${shlibs:Depends}, ${misc:Depends}, libncbi-vdb3 (= ${binary:Version}), libncbi-wvdb-dev (= ${binary:Version}), libaec-dev, libbz2-dev, libzstd-dev, zlib1g-dev Description: libraries for using data in the INSDC Sequence Read Archives (devel) The (US) National Center for Biotechnology Information (NCBI)'s Virtual/Vertical Database (VDB) is a highly compressed column-oriented data warehousing technology developed initially to address the needs of the Sequence Read Archive (SRA). It is unique in that it builds databases from smaller parts that can function independently as _documents_, supports effective and efficient compression, supports encryption while remaining encrypted on disk, transparent distribution and remote access. . This is the development package for reading VDB data. Package: ncbi-vdb-data Architecture: all Multi-Arch: foreign Section: libs Depends: ${misc:Depends} Breaks: libncbi-vdb2 (<< 2.11.2+dfsg-5~) Replaces: libncbi-vdb2 (<< 2.11.2+dfsg-5~) Description: schemata and defaults for the INSDC Sequence Read Archives The (US) National Center for Biotechnology Information (NCBI)'s Virtual/Vertical Database (VDB) is a highly compressed column-oriented data warehousing technology developed initially to address the needs of the Sequence Read Archive (SRA). It is unique in that it builds databases from smaller parts that can function independently as _documents_, supports effective and efficient compression, supports encryption while remaining encrypted on disk, transparent distribution and remote access. . This package contains VDB schemata for SRA data and default configuration files for VDB libraries. Package: libncbi-wvdb3 Architecture: amd64 arm64 x32 Multi-Arch: same Section: libs Depends: ${shlibs:Depends}, ${misc:Depends}, ncbi-vdb-data (>= ${source:Version}) Description: virtual layer update module of ncbi-vdb library The (US) National Center for Biotechnology Information (NCBI)'s Virtual/Vertical Database (VDB) is a highly compressed column-oriented data warehousing technology developed initially to address the needs of the Sequence Read Archive (SRA). It is unique in that it builds databases from smaller parts that can function independently as _documents_, supports effective and efficient compression, supports encryption while remaining encrypted on disk, transparent distribution and remote access. . This package contains a runtime library for updating VDB data. Package: libncbi-wvdb-dev Architecture: amd64 arm64 x32 Multi-Arch: same Section: libdevel Depends: ${shlibs:Depends}, ${misc:Depends}, libncbi-wvdb3 (= ${binary:Version}) Description: virtual layer update module of ncbi-vdb library (devel) The (US) National Center for Biotechnology Information (NCBI)'s Virtual/Vertical Database (VDB) is a highly compressed column-oriented data warehousing technology developed initially to address the needs of the Sequence Read Archive (SRA). It is unique in that it builds databases from smaller parts that can function independently as _documents_, supports effective and efficient compression, supports encryption while remaining encrypted on disk, transparent distribution and remote access. . This package contains development files for updating VDB data. Package: libsam-extract3 Architecture: amd64 arm64 x32 Multi-Arch: same Section: libs Depends: ${shlibs:Depends}, ${misc:Depends} Description: SAM extraction module of ncbi-vdb library The (US) National Center for Biotechnology Information (NCBI)'s Virtual/Vertical Database (VDB) is a highly compressed column-oriented data warehousing technology developed initially to address the needs of the Sequence Read Archive (SRA). It is unique in that it builds databases from smaller parts that can function independently as _documents_, supports effective and efficient compression, supports encryption while remaining encrypted on disk, transparent distribution and remote access. . This library is part of the ncbi-vdb package and provides an interface for extracting Sequence/Alignment Map (SAM) files. Package: libsam-extract-dev Architecture: amd64 arm64 x32 Multi-Arch: same Section: libdevel Depends: ${shlibs:Depends}, ${misc:Depends}, libsam-extract3 (= ${binary:Version}) Description: SAM extraction module of ncbi-vdb library (devel) The (US) National Center for Biotechnology Information (NCBI)'s Virtual/Vertical Database (VDB) is a highly compressed column-oriented data warehousing technology developed initially to address the needs of the Sequence Read Archive (SRA). It is unique in that it builds databases from smaller parts that can function independently as _documents_, supports effective and efficient compression, supports encryption while remaining encrypted on disk, transparent distribution and remote access. . This library is part of the ncbi-vdb package and provides development files for extracting Sequence/Alignment Map (SAM) files.