Source: optimir Maintainer: Debian Med Packaging Team Uploaders: Dylan Aïssi Section: science Priority: optional Build-Depends: debhelper-compat (= 13), dh-python, python3, python3-setuptools Standards-Version: 4.6.0 Vcs-Browser: https://salsa.debian.org/med-team/optimir Vcs-Git: https://salsa.debian.org/med-team/optimir.git Homepage: https://github.com/FlorianThibord/OptimiR Rules-Requires-Root: no Package: optimir Architecture: all Depends: ${misc:Depends}, ${shlibs:Depends}, ${python3:Depends}, python3-pysam, python3-biopython, bowtie2, cutadapt, samtools Recommends: r-cran-gridextra, r-cran-ggplot2 Description: Integrating genetic variations in miRNA alignment OptimiR is a miRSeq data alignment workflow. It integrates genetic information to assess the impact of variants on miRNA expression. . OptimiR: A bioinformatics pipeline designed to detect and quantify miRNAs, isomiRs and polymiRs from miRSeq data, & study the impact of genetic variations on polymiRs' expression.