Source: pbbam Maintainer: Debian Med Packaging Team Uploaders: Afif Elghraoui Section: science Priority: optional Build-Depends: debhelper (>= 12~), dh-exec, d-shlibs, meson, pkg-config, python, # swig3.0, libboost-dev (>= 1.54), zlib1g-dev, libssl-dev, libhts-dev, # Test-Depends: libgtest-dev, python-cram, samtools Standards-Version: 4.3.0 Vcs-Browser: https://salsa.debian.org/med-team/pbbam Vcs-Git: https://salsa.debian.org/med-team/pbbam.git Homepage: http://pbbam.readthedocs.org/en/latest/index.html Package: pbbamtools Architecture: any Depends: ${shlibs:Depends}, ${misc:Depends}, libpbbam0.19.0 (= ${binary:Version}) Recommends: samtools Description: processing Pacific Biosciences binary alignment/map files The BAM format is a binary, compressed, record-oriented container format for raw or aligned sequence reads. The associated SAM format is a text representation of the same data. The specifications for BAM/SAM are maintained by the SAM/BAM Format Specification Working Group. . PacBio-produced BAM files are fully compatible with the BAM specification, but makes use of the extensibility mechanisms of the BAM specification to encode PacBio-specific information. . This package provides command-line utilities for working with PacBio BAM files. Package: libpbbam0.19.0 Architecture: any Multi-Arch: same Section: libs Depends: ${shlibs:Depends}, ${misc:Depends} Pre-Depends: ${misc:Pre-Depends} Breaks: libpbbam (<< ${source:Version}) Replaces: libpbbam Description: Pacific Biosciences binary alignment/map (BAM) library The BAM format is a binary, compressed, record-oriented container format for raw or aligned sequence reads. The associated SAM format is a text representation of the same data. The specifications for BAM/SAM are maintained by the SAM/BAM Format Specification Working Group. . PacBio-produced BAM files are fully compatible with the BAM specification, but makes use of the extensibility mechanisms of the BAM specification to encode PacBio-specific information. The pbbam library provides tools to work with these files Package: libpbbam-dev Architecture: any Section: libdevel Depends: libpbbam0.19.0 (= ${binary:Version}), libhts-dev, libssl-dev, ${misc:Depends} Breaks: libpbbam (<< 0.18) Replaces: libpbbam (<< 0.18) Description: Pacific Biosciences binary alignment/map (BAM) library (headers) The BAM format is a binary, compressed, record-oriented container format for raw or aligned sequence reads. The associated SAM format is a text representation of the same data. The specifications for BAM/SAM are maintained by the SAM/BAM Format Specification Working Group. . PacBio-produced BAM files are fully compatible with the BAM specification, but makes use of the extensibility mechanisms of the BAM specification to encode PacBio-specific information. The pbbam library provides tools to work with these files . This package contains the library header files.