Source: python-cogent
Standards-Version: 4.7.4
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:
 Steffen Moeller <moeller@debian.org>,
 Andreas Tille <tille@debian.org>,
Section: python
Testsuite: autopkgtest-pkg-pybuild
Build-Depends:
 architecture-is-64-bit,
 architecture-is-little-endian,
 cython3,
 debhelper-compat (= 14),
 dh-sequence-python3,
 pandoc,
 pybuild-plugin-pyproject,
 python3-all-dev,
 python3-charset-normalizer,
 python3-isort,
 python3-loky,
 python3-matplotlib,
 python3-numba,
 python3-numpy,
 python3-numpy-dev,
 python3-numpydoc,
 python3-pandas,
 python3-plotly,
 python3-pytest <!nocheck>,
 python3-pytest-cov <!nocheck>,
 python3-pytest-xdist <!nocheck>,
 python3-scinexus,
 python3-scipy,
 python3-scitrack,
 python3-stevedore,
 python3-tinydb,
 python3-tqdm,
 python3-typeguard,
 python3-typing-extensions,
 python3-uv-build,
Vcs-Browser: https://salsa.debian.org/med-team/python-cogent
Vcs-Git: https://salsa.debian.org/med-team/python-cogent.git
Homepage: https://github.com/cogent3/cogent3

Package: python3-cogent3
Architecture: any
Depends:
 ${misc:Depends},
 ${python3:Depends},
 ${shlibs:Depends},
Recommends:
 dialign,
 ncbi-blast+-legacy,
Suggests:
 python-cogent-doc,
Provides:
 python-cogent,
Description: framework for genomic biology
 PyCogent is a software library for genomic biology. It is a fully
 integrated and thoroughly tested framework for:
  * controlling third-party applications,
  * devising workflows; querying databases,
  * conducting novel probabilistic analyses of biological sequence
    evolution, and
  * generating publication quality graphics.
 It is distinguished by many unique built-in capabilities (such as true codon
 alignment) and the frequent addition of entirely new methods for the analysis
 of genomic data.