Source: r-bioc-genomicranges
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders: Andreas Tille <tille@debian.org>
Section: gnu-r
Testsuite: autopkgtest-pkg-r
Priority: optional
Build-Depends: debhelper-compat (= 13),
               architecture-is-64-bit,
               dh-r,
               r-base-dev,
               r-bioc-biocgenerics (>= 0.50.0),
               r-bioc-s4vectors (>= 0.42.1),
               r-bioc-iranges (>= 2.38.1),
               r-bioc-genomeinfodb (>= 1.40.1),
               r-bioc-xvector (>= 0.44.0)
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-bioc-genomicranges
Vcs-Git: https://salsa.debian.org/r-pkg-team/r-bioc-genomicranges.git
Homepage: https://bioconductor.org/packages/GenomicRanges/
Rules-Requires-Root: no

Package: r-bioc-genomicranges
Architecture: any
Depends: ${R:Depends},
         ${shlibs:Depends},
         ${misc:Depends},
         r-bioc-biocgenerics (>= 0.50.0),
         r-bioc-s4vectors (>= 0.42.1),
         r-bioc-iranges (>= 2.38.1),
         r-bioc-genomeinfodb (>= 1.40.1),
         r-bioc-xvector (>= 0.44.0)
Recommends: ${R:Recommends}
Suggests: ${R:Suggests},
          r-bioc-biobase (>= 2.64.0),
          r-bioc-annotationdbi (>= 1.66.0),
          r-bioc-annotate (>= 1.82.0),
          r-bioc-biostrings (>= 2.72.1),
          r-bioc-summarizedexperiment (>= 1.34.0),
          r-bioc-rsamtools (>= 2.20.0),
          r-bioc-genomicalignments (>= 1.40.0),
          r-bioc-rtracklayer (>= 1.64.0),
          r-bioc-bsgenome (>= 1.72.0),
          r-bioc-genomicfeatures (>= 1.56.0),
          r-bioc-gviz (>= 1.48.0),
          r-bioc-variantannotation (>= 1.50.0),
          r-bioc-annotationhub (>= 3.12.0),
          r-bioc-deseq2 (>= 1.44.0),
          r-bioc-dexseq (>= 1.50.0),
          r-bioc-edger (>= 4.2.0),
          r-bioc-keggrest (>= 1.44.1),
          r-bioc-biocstyle (>= 2.32.1)
Description: BioConductor representation and manipulation of genomic intervals
 The ability to efficiently store genomic annotations and alignments is
 playing a central role when it comes to analyze high-throughput
 sequencing data (a.k.a. NGS data). The package defines general purpose
 containers for storing genomic intervals as well as more specialized
 containers for storing alignments against a reference genome.