Source: r-bioc-mutationalpatterns
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders: Andreas Tille <tille@debian.org>
Section: gnu-r
Testsuite: autopkgtest-pkg-r
Priority: optional
Build-Depends: debhelper-compat (= 13),
               dh-r,
               r-base-dev,
               r-bioc-genomicranges (>= 1.56.1),
               r-cran-nmf,
               r-bioc-s4vectors (>= 0.42.1),
               r-bioc-biocgenerics (>= 0.50.0),
               r-bioc-bsgenome (>= 1.72.0),
               r-bioc-variantannotation (>= 1.50.0),
               r-cran-dplyr,
               r-cran-tibble,
               r-cran-purrr,
               r-cran-tidyr,
               r-cran-stringr,
               r-cran-magrittr,
               r-cran-ggplot2,
               r-cran-pracma,
               r-bioc-iranges (>= 2.38.1),
               r-bioc-genomeinfodb (>= 1.40.1),
               r-bioc-biostrings (>= 2.72.1),
               r-cran-ggdendro,
               r-cran-cowplot,
               r-cran-ggalluvial,
               r-cran-rcolorbrewer
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-bioc-mutationalpatterns
Vcs-Git: https://salsa.debian.org/r-pkg-team/r-bioc-mutationalpatterns.git
Homepage: https://bioconductor.org/packages/MutationalPatterns/
Rules-Requires-Root: no

Package: r-bioc-mutationalpatterns
Architecture: all
Depends: ${R:Depends},
         ${misc:Depends},
         r-bioc-genomicranges (>= 1.56.1),
         r-bioc-s4vectors (>= 0.42.1),
         r-bioc-biocgenerics (>= 0.50.0),
         r-bioc-bsgenome (>= 1.72.0),
         r-bioc-variantannotation (>= 1.50.0),
         r-bioc-iranges (>= 2.38.1),
         r-bioc-genomeinfodb (>= 1.40.1),
         r-bioc-biostrings (>= 2.72.1)
Recommends: ${R:Recommends}
Suggests: ${R:Suggests},
          r-bioc-biocstyle (>= 2.32.1),
          r-bioc-biomart (>= 2.60.1),
          r-cran-gridextra (>= 2.2.1),
          r-bioc-rtracklayer (>= 1.64.0),
          r-bioc-genomicfeatures (>= 1.56.0),
          r-bioc-annotationdbi (>= 1.66.0)
Description: GNU R comprehensive genome-wide analysis of mutational processes
 This BioConductor package provides an extensive toolset for the
 characterization and visualization of a wide range of mutational patterns
 in base substitution catalogs.