Source: r-bioc-pwalign
Standards-Version: 4.7.3
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders:
 Michael R. Crusoe <crusoe@debian.org>,
Section: gnu-r
Testsuite: autopkgtest-pkg-r
Build-Depends:
 debhelper-compat (= 13),
 dh-r,
 r-base-dev,
 r-bioc-biocgenerics,
 r-bioc-s4vectors,
 r-bioc-iranges,
 r-bioc-biostrings (>= 2.71.5),
 r-bioc-xvector,
 architecture-is-64-bit,
 architecture-is-little-endian,
Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-bioc-pwalign
Vcs-Git: https://salsa.debian.org/r-pkg-team/r-bioc-pwalign.git
Homepage: https://bioconductor.org/packages/pwalign
Rules-Requires-Root: no

Package: r-bioc-pwalign
Architecture: any
Depends:
 ${R:Depends},
 ${shlibs:Depends},
 ${misc:Depends},
Recommends:
 ${R:Recommends},
Suggests:
 ${R:Suggests},
Description: Perform pairwise sequence alignments
 The two main functions in the package are pairwiseAlignment() and
 stringDist(). The former solves (Needleman-Wunsch) global alignment,
 (Smith-Waterman) local alignment, and (ends-free) overlap alignment
 problems. The latter computes the Levenshtein edit distance or pairwise
 alignment score matrix for a set of strings.