Source: r-bioc-rtracklayer
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders: Andreas Tille <tille@debian.org>,
           Charles Plessy <plessy@debian.org>
Section: gnu-r
Testsuite: autopkgtest-pkg-r
Priority: optional
Build-Depends: debhelper-compat (= 13),
               dh-r,
               r-base-dev,
               architecture-is-64-bit,
               r-bioc-genomicranges (>= 1.56.1),
               r-cran-xml,
               r-bioc-biocgenerics (>= 0.50.0),
               r-bioc-s4vectors (>= 0.42.1),
               r-bioc-iranges (>= 2.38.1),
               r-bioc-xvector (>= 0.44.0),
               r-bioc-genomeinfodb (>= 1.40.1),
               r-bioc-biostrings (>= 2.72.1),
               r-bioc-zlibbioc (>= 1.50.0),
               r-cran-curl,
               r-cran-httr,
               r-bioc-rsamtools (>= 2.20.0),
               r-bioc-genomicalignments (>= 1.40.0),
               r-bioc-biocio (>= 1.14.0),
               r-cran-restfulr,
               libcurl4-openssl-dev
Standards-Version: 4.6.2
Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-bioc-rtracklayer
Vcs-Git: https://salsa.debian.org/r-pkg-team/r-bioc-rtracklayer.git
Homepage: https://bioconductor.org/packages/rtracklayer/
Rules-Requires-Root: no

Package: r-bioc-rtracklayer
Architecture: any
Depends: ${R:Depends},
         ${shlibs:Depends},
         ${misc:Depends},
         r-bioc-genomicranges (>= 1.56.1),
         r-bioc-biocgenerics (>= 0.50.0),
         r-bioc-s4vectors (>= 0.42.1),
         r-bioc-iranges (>= 2.38.1),
         r-bioc-xvector (>= 0.44.0),
         r-bioc-genomeinfodb (>= 1.40.1),
         r-bioc-biostrings (>= 2.72.1),
         r-bioc-zlibbioc (>= 1.50.0),
         r-bioc-rsamtools (>= 2.20.0),
         r-bioc-genomicalignments (>= 1.40.0),
         r-bioc-biocio (>= 1.14.0)
Recommends: ${R:Recommends}
Suggests: ${R:Suggests},
          r-bioc-bsgenome (>= 1.72.0),
          r-bioc-genefilter (>= 1.86.0),
          r-bioc-limma (>= 3.60.3),
          r-bioc-org.hs.eg.db (>= 3.19.1),
          r-bioc-genomicfeatures (>= 1.56.0)
Description: GNU R interface to genome browsers and their annotation tracks
 Extensible framework for interacting with multiple genome browsers
 (currently UCSC built-in) and manipulating annotation tracks in various
 formats (currently GFF, BED, bedGraph, BED15, WIG, BigWig and 2bit
 built-in). The user may export/import tracks to/from the supported
 browsers, as well as query and modify the browser state, such as the
 current viewport.