Source: r-bioc-singler
Section: gnu-r
Priority: optional
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders: Steffen Moeller <moeller@debian.org>
Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-bioc-singler
Vcs-Git: https://salsa.debian.org/r-pkg-team/r-bioc-singler.git
Homepage: https://bioconductor.org/packages/SingleR/
Standards-Version: 4.6.2
Rules-Requires-Root: no
Build-Depends: debhelper-compat (= 13),
               dh-r,
               r-base-dev,
               r-bioc-summarizedexperiment (>= 1.34.0),
               r-cran-matrix,
               r-bioc-s4vectors (>= 0.42.1),
               r-bioc-delayedarray (>= 0.30.1),
               r-bioc-delayedmatrixstats (>= 1.26.0),
               r-bioc-biocparallel (>= 1.38.0),
               r-bioc-biocsingular (>= 1.20.0),
               r-cran-rcpp,
               r-bioc-beachmat (>= 2.20.0),
               r-bioc-biocneighbors (>= 1.22.0),
               architecture-is-64-bit
Testsuite: autopkgtest-pkg-r

Package: r-bioc-singler
Architecture: any
Depends: ${R:Depends},
         ${shlibs:Depends},
         ${misc:Depends},
         r-bioc-summarizedexperiment (>= 1.34.0),
         r-bioc-s4vectors (>= 0.42.1),
         r-bioc-delayedarray (>= 0.30.1),
         r-bioc-delayedmatrixstats (>= 1.26.0),
         r-bioc-biocparallel (>= 1.38.0),
         r-bioc-biocsingular (>= 1.20.0),
         r-bioc-beachmat (>= 2.20.0),
         r-bioc-biocneighbors (>= 1.22.0)
Recommends: ${R:Recommends}
Suggests: ${R:Suggests},
          r-bioc-biocstyle (>= 2.32.1),
          r-bioc-biocgenerics (>= 0.50.0),
          r-bioc-singlecellexperiment (>= 1.26.0),
          r-bioc-scuttle (>= 1.14.0),
          r-bioc-scater (>= 1.32.0),
          r-bioc-scran (>= 1.32.0),
          r-bioc-scrnaseq (>= 2.18.0)
Description: BioConductor reference-based single-cell RNA-Seq annotation
 Performs unbiased cell type recognition from single-cell RNA
 sequencing data, by leveraging reference transcriptomic datasets of pure cell
 types to infer the cell of origin of each single cell independently.