Source: r-bioc-structuralvariantannotation
Standards-Version: 4.7.3
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders:
 Steffen Moeller <moeller@debian.org>,
Section: gnu-r
Testsuite: autopkgtest-pkg-r
Build-Depends:
 debhelper-compat (= 13),
 dh-r,
 r-base-dev,
 r-bioc-genomicranges,
 r-bioc-rtracklayer,
 r-bioc-variantannotation,
 r-bioc-biocgenerics,
 r-cran-assertthat,
 r-bioc-biostrings,
 r-bioc-pwalign,
 r-cran-stringr,
 r-cran-dplyr,
 r-cran-rlang,
 r-bioc-genomicfeatures,
 r-bioc-iranges,
 r-bioc-s4vectors,
 r-bioc-summarizedexperiment,
 r-bioc-genomeinfodb,
 architecture-is-64-bit,
 architecture-is-little-endian,
Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-bioc-structuralvariantannotation
Vcs-Git: https://salsa.debian.org/r-pkg-team/r-bioc-structuralvariantannotation.git
Homepage: https://bioconductor.org/packages/StructuralVariantAnnotation/
Rules-Requires-Root: no

Package: r-bioc-structuralvariantannotation
Architecture: all
Depends:
 ${R:Depends},
 ${misc:Depends},
Recommends:
 ${R:Recommends},
Suggests:
 ${R:Suggests},
Description: Variant annotations for structural variants
 StructuralVariantAnnotation contains useful helper
 functions for dealing with structural variants in VCF format.
 The packages contains functions for parsing VCFs from a number
 of popular callers as well as functions for dealing with
 breakpoints involving two separate genomic loci encoded as
 GRanges objects.