Source: r-cran-shazam
Standards-Version: 4.7.4
Maintainer: Debian R Packages Maintainers <r-pkg-team@alioth-lists.debian.net>
Uploaders:
 Steffen Moeller <moeller@debian.org>,
Section: gnu-r
Testsuite: autopkgtest-pkg-r
Build-Depends:
 debhelper-compat (= 13),
 dh-r,
 r-base-dev,
 r-cran-ggplot2,
 r-cran-alakazam (>= 1.4.1),
 r-cran-ape,
 r-cran-diptest,
 r-cran-doparallel,
 r-cran-dplyr,
 r-cran-foreach,
 r-cran-igraph (>= 1.5.0),
 r-cran-iterators,
 r-cran-kernsmooth,
 r-cran-lazyeval,
 r-cran-mass,
 r-cran-progress,
 r-cran-rlang,
 r-cran-scales,
 r-cran-seqinr,
 r-cran-stringi,
 r-cran-tidyr,
 r-cran-tidyselect,
 architecture-is-64-bit,
 architecture-is-little-endian,
Vcs-Browser: https://salsa.debian.org/r-pkg-team/r-cran-shazam
Vcs-Git: https://salsa.debian.org/r-pkg-team/r-cran-shazam.git
Homepage: https://cran.r-project.org/package=shazam

Package: r-cran-shazam
Architecture: all
Depends:
 ${R:Depends},
 ${misc:Depends},
Recommends:
 ${R:Recommends},
Suggests:
 ${R:Suggests},
Description: Immunoglobulin Somatic Hypermutation Analysis
 Provides a computational framework for analyzing mutations
 in immunoglobulin (Ig) sequences. Includes methods for Bayesian estimation
 of antigen-driven selection pressure, mutational load quantification,
 building of somatic hypermutation (SHM) models, and model-dependent
 distance calculations. Also includes empirically derived models
 of SHM for both mice and humans. Citations: Gupta and Vander Heiden,
 et al (2015) <doi:10.1093/bioinformatics/btv359>, Yaari, et al (2012)
 <doi:10.1093/nar/gks457>, Yaari, et al (2013) <doi:10.3389/fimmu.2013.00358>,
 Cui, et al (2016) <doi:10.4049/jimmunol.1502263>.