Source: rdp-classifier Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller , Tim Booth , Andreas Tille Section: science Priority: optional Build-Depends: debhelper (>= 11~), default-jdk, junit4, libcommons-cli-java, javahelper, rdp-readseq, rdp-alignment, librdp-taxonomy-tree-java, libjfreechart-java, ant, ant-optional, ant-contrib Standards-Version: 4.2.1 Vcs-Browser: https://salsa.debian.org/med-team/rdp-classifier Vcs-Git: https://salsa.debian.org/med-team/rdp-classifier.git Homepage: https://github.com/rdpstaff/classifier Package: rdp-classifier Architecture: all Depends: ${java:Depends}, ${misc:Depends}, default-jre Recommends: rdp-classifier-doc Description: extensible sequence classifier for fungal lsu, bacterial and archaeal 16s The RDP Classifier is a naive Bayesian classifier which was developed to provide rapid taxonomic placement based on rRNA sequence data. The RDP Classifier can rapidly and accurately classify bacterial and archaeal 16s rRNA sequences, and Fungal LSU sequences. It provides taxonomic assignments from domain to genus, with confidence estimates for each assignment. The RDP Classifier likely can be adapted to additional phylogenetically coherent bacterial taxonomies. Package: rdp-classifier-doc Architecture: all Section: doc Depends: ${misc:Depends} Suggests: rdp-classifier Description: documentation and examples for rdp-classifier The RDP Classifier is a naive Bayesian classifier which was developed to provide rapid taxonomic placement based on rRNA sequence data. The RDP Classifier can rapidly and accurately classify bacterial and archaeal 16s rRNA sequences, and Fungal LSU sequences. It provides taxonomic assignments from domain to genus, with confidence estimates for each assignment. The RDP Classifier likely can be adapted to additional phylogenetically coherent bacterial taxonomies. . This package contains the JavaDoc generated HTML and examples for rdp-classifier.