Source: smrtanalysis
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 13),
               python3-pbcore,
               python3-pbcommand,
               python3-pbconsensuscore,
               libpbseq-dev,
               libpbbam-dev
Standards-Version: 4.6.0
Vcs-Browser: https://salsa.debian.org/med-team/smrtanalysis
Vcs-Git: https://salsa.debian.org/med-team/smrtanalysis.git
Homepage: https://www.pacb.com/products-and-services/analytical-software/smrt-analysis/
Rules-Requires-Root: no

Package: smrtanalysis
Architecture: all
Depends: ${misc:Depends},
         pbbamtools,
         blasr,
         pbdagcon
Suggests: pbh5tools,
          pbbarcode,
          pbalign,
          pbgenomicconsensus,
          kineticstools,
          falcon
Description: software suite for single molecule, real-time sequencing
 SMRT® Analysis is a powerful, open-source bioinformatics software suite
 available for analysis of DNA sequencing data from Pacific Biosciences’
 SMRT technology. Users can choose from a variety of analysis protocols that
 utilize PacBio® and third-party tools. Analysis protocols include de novo
 genome assembly, cDNA mapping, DNA base-modification detection, and
 long-amplicon analysis to determine phased consensus sequences.
 .
 This is a metapackage that depends on the components of SMRT Analysis.

Package: smrtanalysis-dev
Architecture: any
Section: libdevel
Depends: ${misc:Depends},
         python3-pbcore,
         python3-pbcommand,
         python3-pbconsensuscore,
         libpbseq-dev,
         libpbbam-dev
Suggests: python-pbgenomicconsensus,
          python-pbh5tools,
          python-pbalign,
          python-kineticstools,
Description: develepment libraries for smrtanalysis
 SMRT® Analysis is a powerful, open-source bioinformatics software suite
 available for analysis of DNA sequencing data from Pacific Biosciences’
 SMRT technology. Users can choose from a variety of analysis protocols that
 utilize PacBio® and third-party tools. Analysis protocols include de novo
 genome assembly, cDNA mapping, DNA base-modification detection, and
 long-amplicon analysis to determine phased consensus sequences.
 .
 This is a metapackage that depends on the SMRTAnalysis development tools.