Source: snp-sites
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Jorge Soares <j.s.soares@gmail.com>,
           Andreas Tille <tille@debian.org>,
           Sascha Steinbiss <satta@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 13),
               zlib1g-dev,
               check,
               pkg-config,
               d-shlibs,
               asciidoctor
Standards-Version: 4.6.0
Vcs-Browser: https://salsa.debian.org/med-team/snp-sites
Vcs-Git: https://salsa.debian.org/med-team/snp-sites.git
Homepage: https://github.com/sanger-pathogens/snp-sites
Rules-Requires-Root: no

Package: snp-sites
Architecture: any
Depends: ${shlibs:Depends},
         ${misc:Depends},
         libsnp-sites1
Description: Binary code for the package snp-sites
 This program finds single nucleotide polymorphism (SNP) sites from
 multi-fasta alignment input files (which might be compressed).   Its
 output can be in various widely used formats (Multi Fasta Alignment,
 Vcf, phylip).
 .
 The software has been developed at the Wellcome Trust Sanger Institute.
 .
 A Single Nucleotide - polymorphism (SNP, pronounced snip; plural snips)
 is a DNA sequence variation occurring when a Single Nucleotide — A, T, C
 or G — in the genome (or other shared sequence) differs between members
 of a biological species or paired chromosomes.  For example, two
 sequenced DNA fragments from different individuals, AAGCCTA to AAGCTTA,
 contain a difference in a single nucleotide.  In this case there are two
 alleles.  Almost all common SNPs have only two alleles.

Package: libsnp-sites1
Architecture: any
Section: libs
Depends: ${shlibs:Depends},
         ${misc:Depends}
Multi-Arch: same
Description: Shared libraries of the package snp-sites
 Snp-sites finds single nucleotide polymorphism (SNP) sites from
 multi-fasta alignment input files (which might be compressed).   Its
 output can be in various widely used formats (Multi Fasta Alignment,
 Vcf, phylip).
 .
 The software has been developed at the Wellcome Trust Sanger Institute.
 .
 This package contains the dynamic library uses by snp-sites.

Package: libsnp-sites1-dev
Architecture: any
Section: libdevel
Depends: ${shlibs:Depends},
         ${misc:Depends},
         libsnp-sites1 (= ${binary:Version})
Conflicts: libsnp-sites-dev
Provides: libsnp-sites-dev
Multi-Arch: same
Description: Static libraries and header files for the package snp-sites
 Snp-sites finds single nucleotide polymorphism (SNP) sites from
 multi-fasta alignment input files (which might be compressed).   Its
 output can be in various widely used formats (Multi Fasta Alignment,
 Vcf, phylip).
 .
 The software has been developed at the Wellcome Trust Sanger Institute.
 .
 This package contains the development files to include snp-sites
 into your own code.  The library enables Python developers to make
 snp-sites function calls (Python bindings) through the Boost Python
 Library.