Source: sourmash
Standards-Version: 4.7.4
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders:
 Michael R. Crusoe <crusoe@debian.org>,
 Debian Rust Maintainers <pkg-rust-maintainers@alioth-lists.debian.net>,
Section: python
Testsuite: autopkgtest-pkg-pybuild
Build-Depends:
 debhelper-compat (= 13),
 dh-cargo,
 dh-sequence-python3,
 dh-sequence-sphinxdoc <!nodoc>,
 architecture-is-64-bit,
 architecture-is-little-endian,
 cargo,
 cargo:native,
 librust-az-1+default-dev,
 librust-byteorder-1+default-dev (>= 1.4.3-~~),
 librust-camino-1+default-dev (>= 1.1.10-~~),
 librust-camino-1+serde1-dev (>= 1.1.10-~~),
 librust-cfg-if-1+default-dev,
 librust-chrono-dev,
 librust-counter-0.6+default-dev,
 librust-counter-dev,
 librust-csv-1+default-dev (>= 1.3-~~),
 librust-enum-dispatch-0.3+default-dev (>= 0.3.13-~~),
 librust-fixedbitset-0.4+default-dev,
 librust-getset-0.1+default-dev,
 librust-histogram-0.11+default-dev,
 librust-itertools-dev,
 librust-log-0.4+default-dev (>= 0.4.27-~~),
 librust-md5-0.8+default-dev,
 librust-memmap2-0.9+default-dev,
 librust-murmurhash3-0.0+default-dev (<< 0.0.6-~~),
 librust-murmurhash3-0.0+default-dev (>= 0.0.5-~~),
 librust-needletail-0.6-dev,
 librust-niffler-2+gz-dev (>= 2.6-~~),
 librust-niffler-2+lzma-dev (>= 2.6-~~),
 librust-niffler-2+zstd-dev (>= 2.6-~~),
 librust-nohash-hasher-0.2+default-dev,
 librust-num-iter-0.1+default-dev (>= 0.1.45-~~),
 librust-once-cell-1+default-dev (>= 1.18.0-~~),
 librust-ouroboros+default-dev (>= 0.15-~~),
 librust-piz-0.5+default-dev,
 librust-primal-check-0.3+default-dev (>= 0.3.4-~~),
 librust-rayon-dev,
 librust-rkyv-dev,
 librust-roaring-0.11+default-dev,
 librust-rocksdb-dev,
 librust-roots-0.0+default-dev (<< 0.0.9-~~),
 librust-roots-0.0+default-dev (>= 0.0.8-~~),
 librust-serde+serde-derive-dev,
 librust-serde-1+default-dev (>= 1.0.219-~~),
 librust-serde-1+derive-dev (>= 1.0.219-~~),
 librust-serde-json-1+default-dev (>= 1.0.141-~~),
 librust-statrs-0.18+default-dev,
 librust-streaming-stats-0.2+default-dev (>= 0.2.3-~~),
 librust-streaming-stats-dev,
 librust-thiserror-dev,
 librust-twox-hash-2-dev,
 librust-typed-builder-dev,
 librust-vec-collections-0.4+default-dev (>= 0.4.3-~~),
 libstd-rust-dev,
 pandoc <!nodoc>,
 pybuild-plugin-pyproject,
 python3-all-dev,
 python3-bitstring,
 python3-cachetools,
 python3-cffi,
 python3-deprecation,
 python3-hypothesis <!nocheck>,
 python3-ijson,
 python3-ipython <!nodoc>,
 python3-matplotlib,
 python3-maturin,
 python3-myst-parser <!nodoc>,
 python3-nbsphinx <!nodoc>,
 python3-numpy,
 python3-pytest <!nocheck>,
 python3-pytest-xdist <!nocheck>,
 python3-scipy,
 python3-screed,
 python3-setuptools,
 python3-setuptools-scm,
 python3-sphinx,
 python3-sphinx-copybutton <!nodoc>,
 python3-sphinx-design <!nodoc>,
 python3-yaml,
 rustc:native (>= 1.74.0),
Vcs-Browser: https://salsa.debian.org/med-team/sourmash
Vcs-Git: https://salsa.debian.org/med-team/sourmash.git
Homepage: https://github.com/sourmash-bio/sourmash

Package: sourmash
Architecture: any
Depends:
 ${misc:Depends},
 ${python3:Depends},
 ${shlibs:Depends},
Built-Using:
 ${cargo:Built-Using},
Description: tools for comparing DNA sequences with MinHash sketches
 Compute MinHash signatures for nucleotide (DNA/RNA) and protein sequences.
 .
 MinHash sketches provide a lightweight way to store “signatures” of large DNA
 or RNA sequence collections, and then compare or search them using a Jaccard
 index. MinHash sketches can be used to identify samples, find similar samples,
 identify data sets with shared sequences, and build phylogenetic trees
 (Ondov et al. 2015).
 .
 sourmash provides a command line script, a Python library, and a CPython
 module for MinHash sketches.
 .
 These tools provide functionality previously handled by the 'khmer' package.
Static-Built-Using: ${cargo:Static-Built-Using}
X-Cargo-Built-Using: ${cargo:X-Cargo-Built-Using}