spades (3.13.0+dfsg2-2) unstable; urgency=medium * Also remove jemalloc from (build-)depends. -- Michael R. Crusoe Thu, 17 Jan 2019 10:12:47 -0800 spades (3.13.0+dfsg2-1) unstable; urgency=medium * Restore the bundled jemalloc as Debian's package is too new. * Pull releases from GitHib. * Standards-Version: 4.3.0 (no changes needed) * Install README.md to /usr/share/doc/spades/ -- Michael R. Crusoe Thu, 17 Jan 2019 07:54:34 -0800 spades (3.13.0+dfsg-1) unstable; urgency=medium * New upstream version * Upstream has removed dipspades -- Andreas Tille Tue, 16 Oct 2018 22:08:43 +0200 spades (3.12.0+dfsg-1) unstable; urgency=medium [ Andreas Tille ] * New upstream version Closes: #897867 * Fix watch file * Add dh-python [ Alexandre Mestiashvili ] * Add tmp link for tests for spades-bwa * Update override_dh_auto_test: implement a workaround so dh_auto_test can access data files * Add bwa to d/tests/control * Remove *.pyc files * Add patch 0118_adjust_spades_home_again.patch replacing 0113_adjust_paths.patch * Update d/patches/spelling * Remove duplicated docs from /usr/share/spades * Bump Policy to 4.2.1, add myself to uploaders * Use https for copyright Format field, s/MIT/Expat/ * Rename overridden tag to debian-watch-does-not-check-gpg-signature -- Alexandre Mestiashvili Mon, 10 Sep 2018 19:37:49 +0000 spades (3.11.1+dfsg-2) unstable; urgency=medium * Build-Depends: libnlopt-cxx-dev Closes: #902592 * d/rules: + filter nocheck,$(DEB_BUILD_OPTIONS) + do not parse d/changelog * debhelper 11 * Point Vcs fields to salsa.debian.org * Standards-Version: 4.1.4 -- Andreas Tille Fri, 06 Jul 2018 10:54:09 +0200 spades (3.11.1+dfsg-1) unstable; urgency=medium [ Sascha Steinbiss ] * New upstream release. * Bump Standards-Version. * Remove obsolete Testsuite: entry in d/control * Add d/copyright entry for new included BBHash headers. [ Steffen Moeller ] * debian/upstream/metadata: - added references to registries - yamllint cleanliness -- Sascha Steinbiss Mon, 18 Dec 2017 00:29:26 +0000 spades (3.10.1+dfsg-3) unstable; urgency=medium * Fix FTBFS with GCC 7. Closes: #853666 * Update homepage. * Bump Standards-Version. -- Sascha Steinbiss Thu, 10 Aug 2017 16:39:50 +0200 spades (3.10.1+dfsg-2) unstable; urgency=medium * Upload to unstable. -- Sascha Steinbiss Sun, 18 Jun 2017 16:31:57 +0000 spades (3.10.1+dfsg-1) experimental; urgency=medium [ Michael R. Crusoe ] * New upstream version 3.10.1+dfsg [ Sascha Steinbiss ] * Build for experimental. -- Sascha Steinbiss Fri, 21 Apr 2017 17:54:15 +0000 spades (3.9.1+dfsg-1) unstable; urgency=medium * New upstream release. -- Sascha Steinbiss Wed, 07 Dec 2016 06:31:19 +0000 spades (3.9.0+dfsg-1) unstable; urgency=medium * New upstream release. * Add copyright entry for cxxopts. * Add rnaSPAdes manpage, wrappers, tests. -- Sascha Steinbiss Sun, 24 Jul 2016 13:12:31 +0000 spades (3.8.2+dfsg2-1) unstable; urgency=medium * Make sure bundled headers are not used by cleaning orig tarball. -- Sascha Steinbiss Tue, 19 Jul 2016 20:57:51 +0000 spades (3.8.2+dfsg-1) unstable; urgency=medium * New upstream release. * Adapt patches for new upstream code. * Remove unused override. * Build with debug symbols. -- Sascha Steinbiss Mon, 11 Jul 2016 08:39:53 +0000 spades (3.8.1+dfsg-2) unstable; urgency=medium * Stop using embedded libnlopt, libssw and libhat-trie. * Update email addresses. -- Sascha Steinbiss Sat, 02 Jul 2016 17:45:37 +0000 spades (3.8.1+dfsg-1) unstable; urgency=medium * New upstream release. -- Sascha Steinbiss Mon, 13 Jun 2016 09:02:52 +0000 spades (3.8.0+dfsg-1) unstable; urgency=medium * New upstream release. * Drop patches that are no longer necessary. * Update licenses. * Add metaspades and plasmidspades symlinks. * Add man page stubs for metaspades and plasmidspades. * Bump Standards-Version. -- Sascha Steinbiss Sun, 05 Jun 2016 09:56:42 +0000 spades (3.7.1+dfsg-3) unstable; urgency=medium * Force LANG and LANGUAGE to ensure reproducibility. * Enable compiler messages. -- Sascha Steinbiss Thu, 21 Apr 2016 14:44:14 +0000 spades (3.7.1+dfsg-2) unstable; urgency=medium [ Sascha Steinbiss ] * Use asciidoctor instead of ronn for reproducible man pages * enable full hardening * add override for pedantic Lintian msg * use correct YAML module Closes: #818584 [ Afif Elghraoui ] * Replace patch with a sed command to fix python-yaml imports -- Sascha Steinbiss Fri, 18 Mar 2016 14:25:06 +0000 spades (3.7.1+dfsg-1) unstable; urgency=medium * New upstream release. * Add gbp.conf to always use pristine-tar. -- Sascha Steinbiss Sat, 12 Mar 2016 07:23:31 +0000 spades (3.7.0+dfsg-1) unstable; urgency=medium * Make changelog building reproducible. * New upstream release. * Update d/copyright. -- Sascha Steinbiss Wed, 24 Feb 2016 22:02:53 +0000 spades (3.6.2+dfsg-2) unstable; urgency=medium * Use Debian's jemalloc. * Fix spelling issues. * Bump Standards-Version. -- Sascha Steinbiss Mon, 22 Feb 2016 09:27:51 +0000 spades (3.6.2+dfsg-1) unstable; urgency=low * Initial release (Closes: #813988) -- Sascha Steinbiss Sun, 07 Feb 2016 10:21:39 +0000