Source: spaln Maintainer: Debian Med Packaging Team Uploaders: Steffen Moeller Section: science Priority: optional Build-Depends: debhelper-compat (= 13), zlib1g-dev Standards-Version: 4.6.2 Vcs-Browser: https://salsa.debian.org/med-team/spaln Vcs-Git: https://salsa.debian.org/med-team/spaln.git Homepage: https://github.com/ogotoh/spaln Rules-Requires-Root: no Package: spaln Architecture: amd64 arm64 mips64el ppc64el s390x alpha ia64 kfreebsd-amd64 ppc64 riscv64 sparc64 Depends: ${shlibs:Depends}, ${misc:Depends}, spaln-data, zlib1g Description: splicing-aware transcript-alignment to genomic DNA Spaln (space-efficient spliced alignment) is a stand-alone program that maps and aligns a set of cDNA or protein sequences onto a whole genomic sequence in a single job. It also performs spliced or ordinary alignment after rapid similarity search against a protein sequence database, if a genomic segment or an amino acid sequence is given as a query. . spaln supports a combination of protein sequence database and a given genomic segment and performs rapid similarity searches and (semi-)global alignments of a set of protein sequence queries against a protein sequence database. Spaln adopts multi-phase heuristics that makes it possible to perform the job on a conventional personal computer. Package: spaln-data Architecture: all Depends: ${misc:Depends} Multi-Arch: foreign Description: splicing-aware transcript-alignment to genomic DNA (data) Spaln (space-efficient spliced alignment) is a stand-alone program that maps and aligns a set of cDNA or protein sequences onto a whole genomic sequence in a single job. It also performs spliced or ordinary alignment after rapid similarity search against a protein sequence database, if a genomic segment or an amino acid sequence is given as a query. . spaln supports a combination of protein sequence database and a given genomic segment and performs rapid similarity searches and (semi-)global alignments of a set of protein sequence queries against a protein sequence database. Spaln adopts multi-phase heuristics that makes it possible to perform the job on a conventional personal computer. . This package contains the architecture independent data files.