Source: sprai
Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org>
Uploaders: Andreas Tille <tille@debian.org>
Section: science
Priority: optional
Build-Depends: debhelper-compat (= 12)
Standards-Version: 4.5.0
Vcs-Browser: https://salsa.debian.org/med-team/sprai
Vcs-Git: https://salsa.debian.org/med-team/sprai.git
Homepage: https://web.archive.org/web/20180316202959/http://zombie.cb.k.u-tokyo.ac.jp/sprai/
Rules-Requires-Root: no

Package: sprai
Architecture: any
Depends: ${shlibs:Depends},
         ${misc:Depends},
         ${perl:Depends},
         ncbi-blast+,
         time
Suggests: pbh5tools,
          pbgenomicconsensus,
          pbalign,
          make
Description: single-pass sequencing read accuracy improver
 Sprai is a tool to correct sequencing errors in single-pass reads for
 de novo assembly. It is originally designed for correcting sequencing
 errors in single-molecule DNA sequencing reads, especially in Continuous
 Long Reads (CLRs) generated by PacBio RS sequencers. The goal of Sprai is
 not maximizing the accuracy of error-corrected reads. Instead, Sprai aims
 at maximizing the continuity (i.e., N50 contig length) of assembled contigs
 after error correction.