Source: subread Maintainer: Debian Med Packaging Team Uploaders: Alexandre Mestiashvili , Andreas Tille Section: science Priority: optional Build-Depends: bc, debhelper (>= 9), help2man, python3, zlib1g-dev Standards-Version: 4.4.0 Vcs-Browser: https://salsa.debian.org/med-team/subread Vcs-Git: https://salsa.debian.org/med-team/subread.git Homepage: http://sourceforge.net/projects/subread/ Package: subread Architecture: amd64 arm64 armel armhf i386 kfreebsd-amd64 kfreebsd-i386 ppc64el Depends: ${misc:Depends}, ${shlibs:Depends} Description: toolkit for processing next-gen sequencing data Subread aligner can be used to align both gDNA-seq and RNA-seq reads. Subjunc aligner was specified designed for the detection of exon-exon junction. For the mapping of RNA-seq reads, Subread performs local alignments and Subjunc performs global alignments. Package: subread-data Architecture: all Depends: ${misc:Depends}, ${shlibs:Depends} Description: data files for subread package This package provides data files from the original tarball: - annotation: Directory including NCBI RefSeq gene annotations for genomes 'hg19', 'mm10' and 'mm9'. Each row is an exon. Entrez gene identifiers and chromosomal coordinates are provided for each exon. - test: Directory including test data and scripts.