Source: theseus Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Section: science Priority: optional Build-Depends: debhelper (>= 11~), libgsl-dev Standards-Version: 4.2.1 Vcs-Browser: https://salsa.debian.org/med-team/theseus Vcs-Git: https://salsa.debian.org/med-team/theseus.git Homepage: http://www.theseus3d.org Package: theseus Architecture: any Depends: ${shlibs:Depends}, ${misc:Depends}, clustalo, muscle Suggests: clustalw, mafft, t-coffee, kalign, dialign, probcons, theseus-examples Description: superimpose macromolecules using maximum likelihood Theseus is a program that simultaneously superimposes multiple macromolecular structures. Theseus finds the optimal solution to the superposition problem using the method of maximum likelihood. By down-weighting variable regions of the superposition and by correcting for correlations among atoms, the ML superposition method produces very accurate structural alignments. . When macromolecules with different residue sequences are superimposed, other programs and algorithms discard residues that are aligned with gaps. Theseus, however, uses a novel superimposition algorithm that includes all of the data. Package: theseus-examples Architecture: all Depends: ${misc:Depends} Enhances: theseus Breaks: theseus (<= 3.0.0-1) Replaces: theseus (<= 3.0.0-1) Description: superimpose macromolecules using maximum likelihood (examples) Theseus is a program that simultaneously superimposes multiple macromolecular structures. Theseus finds the optimal solution to the superposition problem using the method of maximum likelihood. By down-weighting variable regions of the superposition and by correcting for correlations among atoms, the ML superposition method produces very accurate structural alignments. . When macromolecules with different residue sequences are superimposed, other programs and algorithms discard residues that are aligned with gaps. Theseus, however, uses a novel superimposition algorithm that includes all of the data. . This package contains usage examples for theseus.