#!/usr/bin/make -f #export DH_VERBOSE = 1 export PYBUILD_NAME=toil export PYBUILD_DESTDIR_python3=debian/toil/ #export PYBUILD_DISABLE=test export PYBUILD_DISABLE_python2=1 %: dh $@ --buildsystem=pybuild override_dh_auto_build: dh_auto_build PYTHONPATH=$(CURDIR)/src $(MAKE) -C docs man SPHINXOPTS="" override_dh_auto_install: dh_auto_install find $(CURDIR)/debian -name cwltoil -delete # remove the below once mesos is packaged and tested find $(CURDIR)/debian -name _toil_mesos_executor -delete override_dh_auto_test: ifeq (,$(filter nocheck,$(DEB_BUILD_OPTIONS))) PYBUILD_SYSTEM=custom \ PYBUILD_TEST_ARGS='HOME={home_dir} {interpreter} setup.py develop --user && PYTHONPATH={dir}/src:$$PYTHONPATH PATH={home_dir}/.local/bin/:$$PATH TOIL_TEST_QUICK=True TOIL_SKIP_DOCKER=True {interpreter} -m pytest -n auto --dist loadscope -vv -W ignore --ignore src/toil/test/lib/aws/test_s3.py --ignore src/toil/test/provisioners/aws/awsProvisionerTest.py --ignore src/toil/test/wdl/wdltoil_test.py --ignore src/toil/test/cwl/cwlTest.py --ignore src/toil/test/src/promisedRequirementTest.py --ignore src/toil/test/lib/test_ec2.py --ignore src/toil/test/batchSystems/batchSystemTest.py --ignore src/toil/test/lib/aws/test_iam.py -k "not (test_bioconda or test_run_conformance or testImportFtpFile or ToilWdlIntegrationTest or SortTest or testCwlexample or testVirtualEnv or ToilDocumentationTest or test_cwl_toil_kill or testImportReadFileCompatibility or CleanWorkDirTest or DeferredFunctionTest or WdlToilTest or test_cactus_integration)" {dir}/src/toil/test' \ dh_auto_test endif # If you need to rebuild the Sphinx documentation # Add spinxdoc to the dh --with line #override_dh_auto_build: # dh_auto_build # PYTHONPATH=. http_proxy='127.0.0.1:9' sphinx-build -N -bhtml docs/ build/html # HTML generator # PYTHONPATH=. http_proxy='127.0.0.1:9' sphinx-build -N -bman docs/ build/man # Manpage generator override_dh_auto_clean: rm -rf .pybuild rm -rf docs/_build find . -name "*.pyc" -delete