ugene (51.0+dfsg-2) unstable; urgency=medium * Patching out _neon methods to avoid build failure on arm64 * Using signed char to allow one to have negative char variables on arm architectures -- Pierre Gruet Fri, 04 Oct 2024 15:38:37 +0200 ugene (51.0+dfsg-1) unstable; urgency=medium * New upstream version 51.0+dfsg * Refreshing patches, removing upstreamed ones * Updating d/copyright * Updating the list of build-dependencies * Updating Lintian overrides -- Pierre Gruet Tue, 01 Oct 2024 23:01:38 +0200 ugene (50.0+dfsg-2) unstable; urgency=medium * Looking for plugins in their Debian install directory (Closes: #1071435) -- Pierre Gruet Wed, 05 Jun 2024 15:32:56 +0200 ugene (50.0+dfsg-1) unstable; urgency=medium * New upstream version 50.0+dfsg * Refreshing patches * Raising Standards version to 4.7.0 (no change) * Adding myself as Uploader * Bumping years in d/copyright * Marking ugene-data as Multi-Arch: foreign * Providing a MetaInfo file for ugene * Removing now useless patch about missing header * Adding a patch for incomplete .desktop file entries * Adding a Lintian override for txt files in the -data package -- Pierre Gruet Wed, 24 Apr 2024 14:37:59 +0200 ugene (49.1+dfsg-2) unstable; urgency=medium * Source-only upload to unstable -- Pierre Gruet Tue, 12 Dec 2023 21:13:25 +0100 ugene (49.1+dfsg-1) unstable; urgency=medium * Team upload * New upstream version 49.1+dfsg * Refreshing patches * Shipping to main instead of non-free (Closes: #1018252): - Excluding files with non-free license (*.so and psipred) - Rewriting d/copyright * Updating install paths * Setting the runpaths so that private shared libraries can be found * Fixing spelling mistakes * Using python3 instead of python in shebangs * Fixing Lintian override syntax * Overriding Lintian warnings about spelling errors due to false positives [ Andreas Tille ] * Fix watch file * Standards-Version: 4.6.2 (routine-update) * Build-Depends: s/libprocps-dev/libproc2-dev/ (Closes: #1032688) [ Michael R. Crusoe ] * debian/patches/Fix-for-non-constant-SIGSTKSZ.patch: from Ubuntu, Closes: #1010358 -- Pierre Gruet Tue, 12 Dec 2023 14:49:53 +0100 ugene (40.1+dfsg-1) unstable; urgency=medium [ Steffen Moeller ] * New upstream version [ tony mancill ] * Refresh patches for new upstream version [ Andreas Tille ] * debhelper-compat 13 (routine-update) * Fix watchfile to detect new versions on github * Standards-Version: 4.6.0 (routine-update) * Remove trailing whitespace in debian/changelog (routine-update) * Do not try to install usr/share/applications which is not provided any more -- Andreas Tille Tue, 19 Oct 2021 12:55:46 +0200 ugene (34.0+dfsg-2) unstable; urgency=medium * Team upload. * Add patch for Qt 5.15 (Closes: #974075) -- tony mancill Fri, 04 Dec 2020 14:06:01 -0800 ugene (34.0+dfsg-1) unstable; urgency=medium * New upstream version * Standards-Version: 4.5.0 (routine-update) * Add salsa-ci file (routine-update) * Rules-Requires-Root: no (routine-update) * Use secure URI in Homepage field. * Set upstream metadata fields: Repository, Repository-Browse. -- Steffen Moeller Sat, 28 Mar 2020 17:25:10 +0100 ugene (33.0+dfsg-1) unstable; urgency=medium [ Steffen Moeller ] * New upstream version. Closes: #933334, #943514 * Standards-Version: 4.4.1 (no changes required) * Adjusted patches - Upstream now builds against regular sqlite almost by default - changed default to system sqlite by a patch - Adjusted paths for dh_shlibdeps [ Andreas Tille ] * Remove psipred from upstream source - it is excluded from build anyway * d/watch: dversionmangle=auto (to accept +dfsg[0-9]) * Add external plugins to Recommends as far as these are packaged * Drop Ivan Efremov from Uploaders (thanks for your previous work on this package, Ivan) * Use UGENE_USE_BUNDLED_ZLIB=0 * debhelper-compat 12 * Remove trailing whitespace in debian/changelog * Remove trailing whitespace in debian/control * Remove trailing whitespace in debian/copyright * Set upstream metadata fields: Bug-Database, Bug-Submit. -- Andreas Tille Thu, 09 Jan 2020 15:11:09 +0100 ugene (1.31.1+dfsg-1) unstable; urgency=medium [ Steffen Moeller ] * debian/upstream/metadata: - Added references to registries - yamllint cleanliness [ Andreas Tille ] * New upstream version Closes: #868885, #887305 * Standards-Version: 4.3.0 * Cleanup d/watch * More Files-Excluded * debhelper 12 * Point Vcs fields to salsa.debian.org * Drop unused lintian-overrides -- Andreas Tille Thu, 31 Jan 2019 21:26:13 +0100 ugene (1.25.0+dfsg-1) unstable; urgency=medium * New upstream version Closes: #846557 * debhelper 10 * d/watch: version=4 -- Andreas Tille Tue, 13 Dec 2016 14:15:10 +0100 ugene (1.24.2+dfsg-1) unstable; urgency=medium * Team upload. * New upstream release. * Fix building with GCC 6. - Force empty QMAKE_CXXFLAGS_ISYSTEM as suggested in https://github.com/ugeneunipro/ugene/issues/13. Closes: #834252 -- Sascha Steinbiss Sat, 17 Sep 2016 16:22:33 +0000 ugene (1.23.1+dfsg-1) unstable; urgency=medium * Team upload. * New upstream release. * Upload to allow rebuilding against libprocps6. Closes: #831374 * Rename fixperms target to fix binary-arch-only FTBFS. Closes: #831326 * Bump Standards-Version. * Use secure Vcs-Git. * Enable full hardening. -- Sascha Steinbiss Wed, 27 Jul 2016 21:57:26 +0000 ugene (1.21.0+dfsg-1) unstable; urgency=medium * New upstream version Closes: #810360 * Use xz compression in d/watch -- Andreas Tille Mon, 14 Mar 2016 19:19:42 +0100 ugene (1.20.0+dfsg-1) unstable; urgency=medium * New upstream version * Build-Depends: libprocps-dev (instead of libprocps4-dev) Closes: #810360 * add repacksuffix to d/watch -- Andreas Tille Fri, 08 Jan 2016 19:35:14 +0100 ugene (1.19.0+dfsg-1) unstable; urgency=medium [Andreas Tille] * New upstream version Closes: #785035, #784534 * Remove non necessary harcoded dependencies on transitional packages (Thanks to Lisandro Damián Nicanor Pérez Meyer for the patch) Closes: #784382 * Moved packaging from SVN to Git * cme fix dpkg-control * override false lintian positives (package-contains-timestamped-gzip) * DEP5 fixes [Gert Wollny] * Update to build with QT5 (thanks to Gianfranco Costamagna for the initial transition and pointing out some quirks) * update d/p/use_system_sqlite.patch -- Andreas Tille Sun, 13 Dec 2015 21:05:12 +0100 ugene (1.12.3+dfsg-1) unstable; urgency=low [ Andreas Tille ] * New upstream version Closes: #693655, #675298 * debian/control - cme fix dpkg-control - Build-Depends: libxtst-dev - Moved to non-free (and reported the issue upstream as https://ugene.unipro.ru/tracker/browse/UGENE-1310 Closes: #694044 * debhelper 9 (control+compat) * debian/rules: Rewritten to use short dh [ Olivier Sallou ] * debian/rules, debian/patches: Add hardening flags for compilation -- Andreas Tille Mon, 18 Nov 2013 17:29:54 +0100 ugene (1.9.8+repack-1) experimental; urgency=low * First release to Debian - added README.Debian - increased policy version to 3.9.2 - added URLs for version control system * Added debug package. -- Steffen Moeller Wed, 02 Nov 2011 13:29:07 +0100 ugene (1.9.8+repack-0ubuntu1~oneiric) oneiric; urgency=low * Latest release oneiric build -- Ivan Novikov Thu, 27 Oct 2011 15:33:13 +0700 ugene (1.9.8+repack-0ubuntu1~natty) natty; urgency=low * New upstream release -- Ivan Novikov Thu, 27 Oct 2011 12:25:50 +0700 ugene (1.9.5+repack-0ubuntu1~natty) natty; urgency=low * New upstream release -- Alexey Kuznecov Wed, 03 Aug 2011 20:20:50 +0700 ugene (1.9.4+repack-0ubuntu1~maverick) maverick; urgency=low * Latest release maverick build -- Alexey Kuznecov Thu, 14 Jul 2011 21:15:23 +0700 ugene (1.9.4+repack-0ubuntu1~natty) natty; urgency=low * New upstream release * Copyright information updated -- Alexey Kuznecov Thu, 14 Jul 2011 21:07:52 +0700 ugene (1.9.3+repack-0ubuntu1~maverick) maverick; urgency=low * Latest release maverick build -- Konstantin Okonechnikov Wed, 15 Jun 2011 10:42:00 +0700 ugene (1.9.2+repack-0ubuntu1~maverick) maverick; urgency=low * Latest release maverick build -- Konstantin Okonechnikov Tue, 29 Mar 2011 11:25:00 +0700 ugene (1.9.1+repack-0ubuntu3) maverick; urgency=low * Latest release maverick build, new build attempt -- Konstantin Okonechnikov Thu, 10 Feb 2011 10:37:17 +0700 ugene (1.9.1+repack-0ubuntu2) maverick; urgency=low * Latest release maverick build, new build attempt -- Konstantin Okonechnikov Wed, 09 Feb 2011 13:55:17 +0700 ugene (1.9.1+repack-0ubuntu1) maverick; urgency=low * Latest release maverick build -- Konstantin Okonechnikov Wed, 09 Feb 2011 12:55:17 +0700 ugene (1.7.2+repack-0ubuntu1) lucid; urgency=low * Latest release lucid build * Merging with changes from official Ubuntu package -- Konstantin Okonechnikov Mon, 23 Aug 2010 16:55:17 +0700 ugene (1.6.2+repack-0ubuntu2) lucid; urgency=low * Latest release lucid build -- Konstantin Okonechnikov Wed, 12 May 2010 12:58:00 +0700 ugene (1.6.2+repack-0ubuntu1~ppa1~karmic1) karmic; urgency=low * New upstream release * Copyright information updated -- Konstantin Okonechnikov Tue, 7 Apr 2009 00:15:00 +0600 ugene (1.5.2+repack-0ubuntu1) karmic; urgency=low * New upstream release * Copyright information updated -- Ivan Efremov Mon, 06 Jul 2009 12:58:00 +0700 ugene (1.5.1+repack-0ubuntu1) karmic; urgency=low * New upstream release * Copyright information updated -- Ivan Efremov Fri, 17 Jul 2009 18:04:24 +0700 ugene (1.5.0+repack-0ubuntu1) karmic; urgency=low * New upstream release * Copyright information updated * Versions of needed packages are bumped up because of some bugs in older versions -- Ivan Efremov Tue, 07 Jul 2009 16:39:27 +0700 ugene (1.4.2+repack-0ubuntu1) karmic; urgency=low * New upstream release -- Morten Kjeldgaard Tue, 16 Jun 2009 13:20:00 +0200 ugene (1.4.1+repack-0ubuntu1) karmic; urgency=low * New upstream release. * Bump-up Standards. -- Alessio Treglia Thu, 30 Apr 2009 08:14:03 +0200 ugene (1.3.3+repack-0ubuntu1) jaunty; urgency=low [ Bhavani Shankar ] * New Upstream version (LP: #326830) * Files unneeded for this package were removed from the original tarball. [ Morten Kjeldgaard ] * Fixed debian/watch to mangle local name * Fixed get-orig-source rule to name repackaged tarball correctly. * Copyright for two files specified. -- Bhavani Shankar Sun, 08 Feb 2009 16:32:24 +0530 ugene (1.3.2+repack-0ubuntu1) jaunty; urgency=low * Initial packaging (LP: #319917) * Files unneeded for this package were removed from the original tarball -- Ivan Efremov Mon, 26 Jan 2009 19:17:51 +0600