Source: unicycler Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Liubov Chuprikova Section: science Priority: optional Build-Depends: debhelper-compat (= 13), dh-python, python3-all, python3-setuptools, default-jdk , bcftools, bowtie2 , miniasm, ncbi-blast+ , pilon , racon, samtools , spades (>= 3.14), libseqan2-dev, zlib1g-dev Standards-Version: 4.6.1 Vcs-Browser: https://salsa.debian.org/med-team/unicycler Vcs-Git: https://salsa.debian.org/med-team/unicycler.git Homepage: https://github.com/rrwick/Unicycler Rules-Requires-Root: no Package: unicycler Architecture: any Depends: ${python3:Depends}, ${shlibs:Depends}, ${misc:Depends}, python3-setuptools, default-jre, bcftools, bowtie2, miniasm, ncbi-blast+, pilon, racon, samtools, spades (>= 3.14) Recommends: unicycler-data Description: hybrid assembly pipeline for bacterial genomes Unicycler is an assembly pipeline for bacterial genomes. It can assemble Illumina-only read sets where it functions as a SPAdes-optimiser. It can also assembly long-read-only sets (PacBio or Nanopore) where it runs a miniasm+Racon pipeline. For the best possible assemblies, give it both Illumina reads and long reads, and it will conduct a hybrid assembly. Package: unicycler-data Architecture: all Multi-Arch: foreign Depends: ${misc:Depends} Description: hybrid assembly pipeline for bacterial genomes (data package) Unicycler is an assembly pipeline for bacterial genomes. It can assemble Illumina-only read sets where it functions as a SPAdes-optimiser. It can also assembly long-read-only sets (PacBio or Nanopore) where it runs a miniasm+Racon pipeline. For the best possible assemblies, give it both Illumina reads and long reads, and it will conduct a hybrid assembly. . This package contains architecture independent data for unicycler.