-----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Sat, 24 Feb 2024 12:56:15 +0100 Source: macs Architecture: source Version: 3.0.1-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> Changed-By: Michael R. Crusoe <crusoe@debian.org> Closes: 1047612 1056813 1057991 Changes: macs (3.0.1-1) unstable; urgency=medium . [ Andreas Tille ] * New upstream version. Closes: #1056813 * New Build-Depends: python3-cykhash, python3-hmmlearn * Fix location of simde header * No runtime dependency from cython Closes: #1057991 . [ Michael R. Crusoe ] * New upstream version * Refreshed patches. * d/copyright: MACS2/khash.h→MACS3/fermi-lite/khash.h * d/clean: remove temp/ directory leftover from test execution. Closes: #1047612 * d/rules: s/MACS2/MACS3/g for new major version. * d/patches/simde: doesn't need forwarding * d/control: build dep on newer packaging version of cykhash to pick up Python 3.12 support. * d/control: build dep on newer packaging version of hmmlearn to pick up Python 3.12 support. * d/rules: choose a better path to the launch script for testing . TODO: cmdline test failures: 16.18.1 checking hmmratac hmmratac_yeast500k_accessible_regions.gappedPeak 16.18.2 checking hmmratac hmmratac_yeast500k_bedpe_accessible_regions.gappedPeak 16.18.3 checking hmmratac hmmratac_yeast500k_load_hmm_model_accessible_regions.gappedPeak 16.18.4 checking hmmratac hmmratac_yeast500k_load_training_regions_accessible_regions.gappedPeak * d/patch/no_install_depends_cython.patch removed, applied upstream. * add patch to force the use of Python3. * d/control: add build-dep on bc for the tests. * d/patches/adapt_to_prelease_hmmlearn.patch: patch from the upstream author to match the prelease version of hmmlearn in the archive. * d/patches/invalid_escape_sequence: fix a SyntaxWarning. Checksums-Sha1: b8fb85c2bc033469ea3d4ae3f974d2b78e436fdb 2152 macs_3.0.1-1.dsc 6aa3b6265224a0ff4ab0087f338620755ed4af24 197400439 macs_3.0.1.orig.tar.gz c279d6ef5a6387825d30102220f5f33213417f1b 1268816 macs_3.0.1-1.debian.tar.xz 898fc83727716b256c9517dfbc93f9ac3a9272b2 9302 macs_3.0.1-1_source.buildinfo Checksums-Sha256: 8300826bd696ab31c81fe4bdb7924578d366d210d8a0960f5731d54cda4b5474 2152 macs_3.0.1-1.dsc 8a2f5b2dccfc255ea2fd5e54e0d6aa9c12f5ce83762b17b779ce2546ade860ce 197400439 macs_3.0.1.orig.tar.gz 0bed7d298871d11a808af98252edc89e68e2ab1364a8b7de56b54e0f7e0173be 1268816 macs_3.0.1-1.debian.tar.xz 3e517eedaa3f25285fae778e347fcbdc3250ef36811f85a355cb64e3e348e066 9302 macs_3.0.1-1_source.buildinfo Files: 7313d5f9202cfd6a672b5b9923b5eb3e 2152 science optional macs_3.0.1-1.dsc 24d97ffa5f603717fcb14c2b0a4c1ecf 197400439 science optional macs_3.0.1.orig.tar.gz d92f0b5c3182c9c71226f45ba5d38eaf 1268816 science optional macs_3.0.1-1.debian.tar.xz e9f7f95c0f1787a87a708a59208df9da 9302 science optional macs_3.0.1-1_source.buildinfo -----BEGIN PGP SIGNATURE----- iQIzBAEBCgAdFiEEck1gkzcRPHEFUNdHPCZ2P2xn5uIFAmXZ27kACgkQPCZ2P2xn 5uIYtQ//SwUIZe/+4nAU9Kd9bfnpVi3TU6E2STYXDD7c7K4K3KvKM2SEFDQ8D9Si X7lgiBrA0gfePvnwlP8VoP8uizQS6jjZzXj2/w2HVlNcs+Hfxil7zPM1rBkqBqnN dUKo/hfBzqT5/qva7GsHd5jyrsz2brN6+O+RwkZN095gmwT30lNHxo0Iuk1Fq6iU XPBfHT5wn0t5zVQQbRjTErARMD6k6t5D70PfglrEhqwpwYI/xE5zgtqs8vdGosA3 ORHWE5Wzv7w6GEsKdSrG4Ng9JQPxFUuH7hg1qYx2doBTI1wlurXetMY7PS9wpI3S ymUP17BNwIJ78i1+pEOZpH9MstanKhoNnKqjtFFXD8htYlQGBEQeHHmJmNjM7NSV PnIzx9U6GZiSE7Q5H/zcqIBWoARz+E6urgxHQ1OwcYDtLsEb76u5ghYHPnIT7Zec qnwttMisYLnQR9TXQZ/eycUiC30jB00OaZuQ3buQwZ2XLmnQDJkhgGuwr37/mV6K iUDZqKPNTgcKuJqGGp6TzE0q7XTEb+CYyU+ovxI2YOb2yF0xKpcKRW8HodAp22Yo 3bsBCHyIrC+4Njyunt9/XXcDxdL9+0+9SmEXXaB8lNiKNa4KuDFIpd00DW6FR/sH mdgLAEmKJWdvI4InRLoJ8CpYQ3MKLHJIcPOZR7xAwJjSi0vYMbk= =olmt -----END PGP SIGNATURE-----
