-----BEGIN PGP SIGNED MESSAGE----- Hash: SHA512 Format: 1.8 Date: Mon, 19 Oct 2026 21:47:24 +0200 Source: sortmerna Architecture: source Version: 7.1.0-1 Distribution: unstable Urgency: medium Maintainer: Debian Med Packaging Team <debian-med-packaging@lists.alioth.debian.org> Changed-By: Andreas Tille <tille@debian.org> Closes: 1072346 1144278 Changes: sortmerna (7.1.0-1) unstable; urgency=medium . * New upstream version * Standards-Version: 4.7.4 (routine-update) * Reflow Uploaders field (cme) * Remove Priority field (cme) * Set upstream metadata fields: Bug-Database, Repository-Browse. * debputy lint --auto-fix (routine-update) * Drop sse2-support dependency Closes: #1144278 * Set upstream metadata fields: Bug-Submit, Repository-Browse. * d/control: - add build-deps librapidarchive-dev, libparasail-dev, libbbhash-dev and zlib1g-dev - drop rapidjson-dev and libconcurrentqueue-dev. * add rapidarchive.patch: use system librapidarchive * add smr-api-disable.patch: skip the self-contained static bundle, which needs static parasail/rocksdb not available in Debian * d/copyright: drop the ssw.c stanza, SSW was removed upstream * d/man/sortmerna.1: update for the 7.1.0 command line * d/tests: rewrite the autopkgtest to run the binary end-to-end against the upstream tiny/small reference data (FASTA, SAM, BLAST and gzip input) and drop the "superficial" restriction. Closes: #1072346 * Build on big endian 64 architectures (upstream supports AMD64 and ARM64) * Drop the i386-only -msse2 workaround. i386 cannot be built anyway because libbbhash-dev is not available there. * d/rules: build with CMake directly instead of pybuild. Newer dh-python delegates to CMake, but older versions (as in trixie) run "setup.py clean", which the upstream setup.py does not implement, so the build failed on arm64. * d/tests: only copy the test data files that are actually needed. * d/salsa-ci.yml: - Do not build on i386 - Do not fail on blhc Checksums-Sha1: f1c2cf38a36a6384930cb69f0fe4c00bfe44bffc 2273 sortmerna_7.1.0-1.dsc b65158e99d898bf477245c7567cbfb4b2c0512be 31463307 sortmerna_7.1.0.orig.tar.gz b30c181eba54eeb78aca18a61cb84f33ab1883b6 14016 sortmerna_7.1.0-1.debian.tar.xz a2d9576b221dbbf660c474cb9d50179a85c7feba 7757 sortmerna_7.1.0-1_amd64.buildinfo Checksums-Sha256: 7653055a70b26b3eb509651f63349076337f670e221cf3687f62da974f9dcf47 2273 sortmerna_7.1.0-1.dsc 110917dd5b5669ad045e84195d164a11d1f65e9ee733ed425d6ee796886809da 31463307 sortmerna_7.1.0.orig.tar.gz e05cdf3804661e4b739f0e95dba3287dafaeeab41eede45f0e5a667fc0c189aa 14016 sortmerna_7.1.0-1.debian.tar.xz 5567dbcf33880092391dde7fd9668d4acc857ee8e22265f8212289c7397f6d62 7757 sortmerna_7.1.0-1_amd64.buildinfo Files: 7d05ed24fbc6f5ec2a6dede1f4a71fe2 2273 science optional sortmerna_7.1.0-1.dsc 2cb6e33ee672608775fe44f65fd9bcbb 31463307 science optional sortmerna_7.1.0.orig.tar.gz 8393b19978377be51a6feb283d4bdf9f 14016 science optional sortmerna_7.1.0-1.debian.tar.xz 9a3af88d5fbaf118ad6d7e5d4b3bff5d 7757 science optional sortmerna_7.1.0-1_amd64.buildinfo -----BEGIN PGP SIGNATURE----- iQJFBAEBCgAvFiEE8fAHMgoDVUHwpmPKV4oElNHGRtEFAmrWer0RHHRpbGxlQGRl Ymlhbi5vcmcACgkQV4oElNHGRtE5yQ//ftzjUNwljTCWyECtzykh5fYPxuPLd8BK 3QSSmeaE/EI3SITIz/oTqDglMFbHPKJQFnCEafJmGu3eNfS8JAUkYujn3Ey9t6vN dtp/0t5tyRX2d11XDIMYJ+EJymcIV0AtA1Aw798ZtmsKKCbeHYMCJh9DDGsy03s/ hPVEMTVxplxg5NlVBIoqa5+5JoOGhWESmZ4NxZkEBteA0Le7aHvsYRV7p+HfGj6+ scA2jT0g6tjFJFYUrRAGL+WDY8QeyPEJiQMSchOmPH3CMzXZeoqBYZA3VwkAEK5E aRwV7rpQLAU5QVPnoyW+hD+4itr24n87luACa8gU6mc29jxs5Emwa8n+giIKDqHB J3FasotL5gsVbbugLu8PZHwHB2YCSCHRP4pOEKpYz/DXQeXHbl2RjNE/iHzw3NWl sQfVpeeq2Ux48azIFXJKwb8TFj1u8uuzRFmHvFL8BTI2rGi35Cupbs5Pe6Jjjfx5 iW8GB4UZvCQagKOpVZI5dCmOxvjmIZ7VFZjlTCSJCFgUB9l56ZWCPp4MKCNcatnW gOUAsW6ckxw7bwCUMn/yPDJe9WyrVycqrFh/UNiVoYKBSUAghqVCUbY9SW5JCrgD qzqkzpDSuxv0HhOr4ZSUZ1WfRFdtjoBKqLKSpr5UlJCuUEt2tM6jvC+fYahJWwvQ qqzFwHXk0hU= =3Mu2 -----END PGP SIGNATURE-----
